| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3507 |
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| Symbol | |
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| ID | 4923059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4193856 |
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| End bp | 4195931 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640165129 |
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| Product | ATP-dependent DNA helicase RecG |
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| Protein accession | YP_001095632 |
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| Protein GI | 127514435 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAGAC TCGATCTCAT GGCTGTGACA GAGTTAAAGG GCGTTGCCGC CAAGATGGCG
CAGCGGCTGG AGAAACTCGG CATCAATACA GTTCAGGATC TGCTGTTTCA CCTGCCGCTA
CGCTACGAAG ACCGCACCCA AATCTATCCC ATCGCCGCCC TCTATCCCGG TAGCTACGGC
ACCATAGAGG GGATCATACA ATCGACCCAG ATCGTCCAGG GCCGCAAGCG TATGCTCACC
TGCACGGTGC GTGACGACTC GGGCACCATA ACCCTGCGCT TCTTCAACTT CTCCGCCGCC
ATGCGTAACG GCCTCGAAGA GGGCGAGCGC ATTCGCGCCT ATGGCGAGGT GCGTCGGGGC
AAGCTTCACC GGGAGATCAT CCACCCGGAA TACAAGATGC TCAACGGCGA GAGCGACTTT
AGCCTCAGCG ATACCCTGAC CCCCATCTAC CCGACCACAG AGGGACTCAA GCAGGCCAGC
TGGATCCGTT TGACGGATCA GGCCCTGGCG CTGCTGGCCC ATGGCGCCCT GACCGAACTA
TTGCCGCCTC AGCTGAGGCC CAATCAACTC TCATTGGTCG ACGCGTTGCA GTTGCTGCAC
AGACCCCCGA GCGAGGTCAG CCCCTTTGCC CTGGAGCAGG GCACGCATCC GGCGCAGCAA
AGGCTGATCC AAGAGGAACT GCTGGCCCAC AACCTGAGCA TGTTACAGCT CAGGGCCCGC
AGCAATCATG ATAAGGCCAT CGCGATGCAG CCCACCGGGC AGCTACTCAA TCCCTTCCTG
GCATCCTTAC CCTTTAAGCC CACTGGCGCC CAGCAGAGAG TGGTAGCCGA TATCACCCAA
GATCTCGACA AGGCACACCC TATGATGCGC CTGGTGCAGG GCGATGTGGG CTCGGGCAAG
ACGCTAGTGG CGGCGCTGGC GGCGCTACAG GCCATAGAGA GCGGCTATCA GGTGGCCATG
ATGGCGCCGA CGGAACTGCT CGCCGAGCAG CACGCCAACA ACTTCGCCGC CTGGTTTGAA
CACCTCGGCC TAACGGTCGG CTGGCTGGCG GGTAAGCTCA AGGGCAAGGC GCGGGCGCAG
TCGCTGCAGC AGATTAAGAG CGGCGAGGCC CATATCGTCA TCGGCACCCA CGCCATCTTT
CAGGAGCAGG TGGAGTTCAA TCGCCTGGCG CTGATCATCA TCGATGAGCA GCACAGGTTC
GGGGTGCATC AACGTCTGGG GCTGCGAGAG AAAGGGATCA GGCAGGGCTT CCACCCACAT
CAGCTGATCA TGACGGCAAC CCCTATCCCC CGCACCTTGG CGATGACCGC CTATGCAGAT
CTCGATACCT CCATCATCGA CGAGCTGCCG CCGGGGCGTA CGCCGGTGAC CACGGTCGCC
ATCTCAGACA ATCGCCGCGG TGAGGTGATC GATCGCGTGC GCCAGGCCGC GCTGCAAGAT
GGGCGTCAAG CCTACTGGGT CTGCACCCTG ATCGAAGAAT CTGAGGTGCT GGAATGTCAG
GCCGCAGAAG ACACGGCCGA GGAGCTTAAG CAGCTGCTGC CCGAGCTCGC CATCGGCCTG
GTGCATGGCC GCATGAAACC CGCCGAGAAA CAAGCGATCA TGGACGCCTT CAAGGCCGGC
AGCATACAGC TACTGGTGGC CACTACAGTG ATCGAGGTGG GGGTCGATGT GCCCAATGCC
AGCCTGATGA TCATCGAAAA CCCCGAGCGT CTGGGGCTCG CCCAGCTGCA TCAGCTGCGG
GGGCGTGTCG GCCGCGGCGC CGTGGCCAGC CACTGTGTGC TGCTCTACAA GGCGCCGCTT
TCCCACACCG CCACCCAGCG CCTGGGAGTG CTTAGAGACA GTAACGACGG CTTCGTGATC
GCCCAGAAAG ATCTGGAGAT CCGCGGGCCG GGTGAGGTCT TAGGCACCAA GCAGACAGGT
ATCGCCGACA TGAAGATAGC GGACTTGGTA CGGGATCAGG CCCTCATCCC CCACATACAG
AAACTGGCCC AACATGTGAT GCAAGAGGTG CCGGAAAATG TTGACGCCAT AGTGCTGCGT
TGGTTAGGGG AGCGCCAGCA ATACGTGCAG GCCTAA
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| Protein sequence | MDRLDLMAVT ELKGVAAKMA QRLEKLGINT VQDLLFHLPL RYEDRTQIYP IAALYPGSYG
TIEGIIQSTQ IVQGRKRMLT CTVRDDSGTI TLRFFNFSAA MRNGLEEGER IRAYGEVRRG
KLHREIIHPE YKMLNGESDF SLSDTLTPIY PTTEGLKQAS WIRLTDQALA LLAHGALTEL
LPPQLRPNQL SLVDALQLLH RPPSEVSPFA LEQGTHPAQQ RLIQEELLAH NLSMLQLRAR
SNHDKAIAMQ PTGQLLNPFL ASLPFKPTGA QQRVVADITQ DLDKAHPMMR LVQGDVGSGK
TLVAALAALQ AIESGYQVAM MAPTELLAEQ HANNFAAWFE HLGLTVGWLA GKLKGKARAQ
SLQQIKSGEA HIVIGTHAIF QEQVEFNRLA LIIIDEQHRF GVHQRLGLRE KGIRQGFHPH
QLIMTATPIP RTLAMTAYAD LDTSIIDELP PGRTPVTTVA ISDNRRGEVI DRVRQAALQD
GRQAYWVCTL IEESEVLECQ AAEDTAEELK QLLPELAIGL VHGRMKPAEK QAIMDAFKAG
SIQLLVATTV IEVGVDVPNA SLMIIENPER LGLAQLHQLR GRVGRGAVAS HCVLLYKAPL
SHTATQRLGV LRDSNDGFVI AQKDLEIRGP GEVLGTKQTG IADMKIADLV RDQALIPHIQ
KLAQHVMQEV PENVDAIVLR WLGERQQYVQ A
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