Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3501 |
Symbol | |
ID | 4923053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4187240 |
End bp | 4187944 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640165123 |
Product | tRNA guanosine-2'-O-methyltransferase |
Protein accession | YP_001095626 |
Protein GI | 127514429 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCAG AACGCTTCAA ACGCATCAAC CAGATGCTGG ACAACCGCCA GACCGACCTC ACTGTCTGCC TGGACAAGGT GCATAAAACC AACAATATCG CCGCGGTGAT CCGCACCGCC GACGCCGTGG GCATACATCA AATCCACGCC GTCTGGCCCG ATATCGAGAT GCGCGTCTCG GGCAATACCG CCTCGGGCAG CCAGCAGTGG GTCAAAACCA TCAAGCACTA CCACATGGAT GAGGCCGCGG CCCAGTTCAA GGCGGCGGGC ATGCAGATTC TGGCCACCAA CTTCTCAGAA AATGCGGTGG ATTTTCGCGA CATCGACTAT ACCAAGCCGA CGGTGGTGAT CATGGGTAAC GAACGCGACG GCGTCAGCGA GGAAGGGCTG GCCATCGCCG ATCAGCAGAT CATCATCCCC ATGATAGGCA TGGTGCAGTC CCTCAATGTG TCTGTGGCCT CCGCCCTGGT GATGTATGAA GCACAGCGTC AACGCGCCGA GGCCGGTATG TATGGCCAGC GCACCCTAGA CGACGCCTAC TGCCAGACCA TGCTGTTCGA GCAGGGCCAC CCTGTGTACG CCAAGGCCTG TCGACGCAAG AAGATCCCCT ATCCCGCCAT CGACGAAAAG GGGCAAATTG TCGCCGACGA GACCTGGTGG CAGCGGATGC GCGCCCCGGA CCCGGACGCC GAGCCAGAAG CCTAA
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Protein sequence | MSPERFKRIN QMLDNRQTDL TVCLDKVHKT NNIAAVIRTA DAVGIHQIHA VWPDIEMRVS GNTASGSQQW VKTIKHYHMD EAAAQFKAAG MQILATNFSE NAVDFRDIDY TKPTVVIMGN ERDGVSEEGL AIADQQIIIP MIGMVQSLNV SVASALVMYE AQRQRAEAGM YGQRTLDDAY CQTMLFEQGH PVYAKACRRK KIPYPAIDEK GQIVADETWW QRMRAPDPDA EPEA
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