| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3500 |
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| Symbol | |
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| ID | 4923052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4186788 |
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| End bp | 4187171 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640165122 |
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| Product | putative endoribonuclease L-PSP |
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| Protein accession | YP_001095625 |
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| Protein GI | 127514428 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA AGATCATCAT TGCAACCGAC AAGGCCCCAC AGGCGATCGG CACCTATTCT
CAAGCTGTTA AAGTTGGCAG CACAGTCTAT CTGTCTGGCC AGATCCCGCT GAACCCAGAA
ACCATGCAGA TGGTTAGCGA CGAGTTTGAA GCCCAGGTCG TGCAGGTGTT CGACAACCTG
ACCGCCGTGT GTGAAGCCGC CGGTGGCAGC CTGAAGGATA TCGTTAAGCT GAACATCTTC
ATGACAGATC TGGCCAACTT CGCCACGGTA AACGAAATCA TGGGTCGCTA CTTCGAGCAG
CCATATCCTG CCCGCGCCGC CATAGGCGTT AAGCAGCTGC CGAAAGACTC GCTGGTCGAG
ATGGATGGCG TGATGGAGCT GTAA
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| Protein sequence | MAEKIIIATD KAPQAIGTYS QAVKVGSTVY LSGQIPLNPE TMQMVSDEFE AQVVQVFDNL
TAVCEAAGGS LKDIVKLNIF MTDLANFATV NEIMGRYFEQ PYPARAAIGV KQLPKDSLVE
MDGVMEL
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