| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3498 |
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| Symbol | rpoZ |
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| ID | 4923050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4184353 |
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| End bp | 4184634 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165120 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_001095623 |
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| Protein GI | 127514426 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGCG TAACTGTAGA AGACGCCGTA AACCAAATCG GCAACCGTTT TGATATGATC
CTGGTTGCAG CGCGTCGTGC TCGCCAAATC GCTGTGCAGG GCAAAGACCC TATGGTTGAA
GAAGAGAACG ACAAGCCAAC GGTTATCGCT CTACGCGAAA TCGAACTTGG CCTGGTTACC
GCCGACACAC TAGACGCCGA TGAGCGTCAG ACCGTCCGCG AACGTGAAGC AGCCGAAATC
GCTGCCGTTG CCGCCATCGC CGAAGGCCGC AACACTATCT AA
|
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| Protein sequence | MARVTVEDAV NQIGNRFDMI LVAARRARQI AVQGKDPMVE EENDKPTVIA LREIELGLVT
ADTLDADERQ TVREREAAEI AAVAAIAEGR NTI
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