| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3483 |
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| Symbol | dut |
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| ID | 4923161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4168723 |
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| End bp | 4169181 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165105 |
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| Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
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| Protein accession | YP_001095608 |
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| Protein GI | 127514411 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0756] dUTPase |
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| TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000740158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACGC CCATAGAACT CAAGATCCTC GATTCTCGCA TCGGCTCACA GTTTCCGCTT
CCCGCCTACG CGACACCGGG CAGTGCCGGC ATGGATCTGC GTGCCATGAT AGAAACCACA
ATGGTGATTC AACCGGGTGA AACCCAGCTG ATCCCAACCG GTATCGCCGT GCATGTGGCC
GATCCCAGCC TGGCGGCCGT CATCCTGCCG CGCTCCGGCA TGGGCCACAA ACATGGCATA
GTGCTGGGCA ACCTGGTCGG TCTTATCGAC TCTGACTATC AGGGTCCCCT GATGGTCTCT
TGCTGGAACC GCAGCAACGA GCCTTTCACC TTGGAGATTG GCGATCGCCT GGCGCAACTG
GTGTTTGTGC CTGTGGTACA AGCCGAATTT AAATTGGTCG ACGAATTCGA CACCTCAGAT
CGAGGCGAAG GCGGTTTCGG CCACTCGGGT ACTCAATAG
|
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| Protein sequence | MKTPIELKIL DSRIGSQFPL PAYATPGSAG MDLRAMIETT MVIQPGETQL IPTGIAVHVA
DPSLAAVILP RSGMGHKHGI VLGNLVGLID SDYQGPLMVS CWNRSNEPFT LEIGDRLAQL
VFVPVVQAEF KLVDEFDTSD RGEGGFGHSG TQ
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