| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3475 |
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| Symbol | |
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| ID | 4922477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4162326 |
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| End bp | 4162790 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165097 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095600 |
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| Protein GI | 127514403 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.523059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACGC CCATACAAGC GCAGACCCTG GCCAGTGTAG CCGATATCTT CGATACCAAG
GTGCCCTTTC ATAACCTCTT GGGGATGGAT ATCAAGCGTT ACGATCTGCA GGGCGTCGAG
GTCGAGGTGA AGATGAAGAA AGACCTCATA GGCAACATTC ATCAGCAGAT CCTCCACGGC
GGCGTGACCG CTACCGTACT AGATGTGGTG GGCGGCCTGA CGGCCTTCTC TGGCCTGGTA
GCCAGCCGAG ACGACTGGTG TTTAGAAGAT CTGCAGCAGC GCCTAAAAAC CTTAGGCACC
ATAGATCTGC GTATCGATTA TCTCAGACCA GGGCGCGGCG AGATCTTTAC CGGCACGGGC
ACAGTGATCA GGGCCGGTAA CCGAGTCTCA GTCTGCCGCA TGGAGCTGCA CAACGAGAAG
GGCTCGCATA TAGCCTTCGG CACTGGCACT TACATGGTGG GCTAG
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| Protein sequence | MTTPIQAQTL ASVADIFDTK VPFHNLLGMD IKRYDLQGVE VEVKMKKDLI GNIHQQILHG
GVTATVLDVV GGLTAFSGLV ASRDDWCLED LQQRLKTLGT IDLRIDYLRP GRGEIFTGTG
TVIRAGNRVS VCRMELHNEK GSHIAFGTGT YMVG
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