Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3456 |
Symbol | mraY |
ID | 4923381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4138831 |
End bp | 4139913 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640165078 |
Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
Protein accession | YP_001095581 |
Protein GI | 127514384 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0139404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTT ATCTGGCTGA GTATCTAACC CAGTTTTATA CCGGGTTTAA CGTTTTCTCA TATGTGACCT TCAGGGCGAT CCTGGGGCTG TTGACCGCCA TGGTGTTTAG CCTGTGGTGG GGACCCAAGA TGATCGAGCG TCTGCAACTG CTGCAGATAG GTCAGGTGGT CCGTAATGAA GGACCCGAGT CGCATTTTGC CAAGCGAGGC ACACCGACCA TGGGTGGCCT GTTGATCTTG GCCGGCGTCT TTATCAGCGT ATTGCTGTGG GGCGATCTGG GTAGCCGCTA CGTGTGGGTC ATGCTCTTCG TGCTGGGCGC CTTCGGCCTT ATCGGCTTTA TCGACGATTA TCGCAAGGTA GTGCGCAAGG ACACCAAGGG GCTTATCGCG CGCTGGAAGT ATATCTTGCA ATCCCTGGCT GCCTTGGCCA TCGCCTTCTA TCTGTACGCC TCGGCGGGCA GTGAAGGCGA AACCCAACTG GTCTTGCCCT TCTTTAAGGA TGTGATGCCA CAGCTGGGCG CCTTCTTCAT CCTGCTGGCT TACTTCACCA TAGTAGGTTC GAGCAACGCG GTGAACCTGA CCGATGGTCT GGATGGTCTG GCGATTATGC CGACCGTGAT GGTAGCTGCT GCTTTTGCGT TGATCGCCTA TCTGTCTGGC CACGTGCAGT TTGCCAACTA CCTGCATATT CCTTATCTGC CTGGCTCGGG CGAGCTGGTG ATCGTCTGTA CCGCCATCGT CGGTGCGGGA TTGGGCTTTT TGTGGTTCAA CACCTATCCG GCCCAGGTCT TCATGGGTGA CGTGGGCTCC CTTTCTCTGG GGGCGGCATT GGGCACCATC GCCGTGTTGG TGCGTCAGGA GATCCTATTG GTGATCATGG GGGGCGTTTT CGTGATGGAG ACAGTTTCTG TGATCCTGCA GGTCGGCTCC TATAAGCTGC GCGGTCAACG TATCTTCAGG ATGGCACCCA TCCATCACCA CTACGAGCTG AAAGGTTGGC CCGAGCCCAG GGTGATCGTG CGTTTCTGGA TCATCTCCCT CTTCCTGGTG TTGCTAGGCT TAGCAACCTT AAAGTTAAGG TAA
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Protein sequence | MLVYLAEYLT QFYTGFNVFS YVTFRAILGL LTAMVFSLWW GPKMIERLQL LQIGQVVRNE GPESHFAKRG TPTMGGLLIL AGVFISVLLW GDLGSRYVWV MLFVLGAFGL IGFIDDYRKV VRKDTKGLIA RWKYILQSLA ALAIAFYLYA SAGSEGETQL VLPFFKDVMP QLGAFFILLA YFTIVGSSNA VNLTDGLDGL AIMPTVMVAA AFALIAYLSG HVQFANYLHI PYLPGSGELV IVCTAIVGAG LGFLWFNTYP AQVFMGDVGS LSLGAALGTI AVLVRQEILL VIMGGVFVME TVSVILQVGS YKLRGQRIFR MAPIHHHYEL KGWPEPRVIV RFWIISLFLV LLGLATLKLR
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