Gene Shew_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3453 
SymbolmurG 
ID4923378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4135191 
End bp4136285 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content59% 
IMG OID640165075 
Productundecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 
Protein accessionYP_001095578 
Protein GI127514381 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID[TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00436373 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTCAG AGAAACGTAT TTTGATCATG GCGGGCGGCA CGGGCGGACA CGTGTTCCCG 
GCGCTTGCCG TGGCCAAAGC GTTAGCCAAA CAGGGTTGGC AGGTGCGCTG GCTTGGCACC
GCCGATCGCA TGGAGGCACG TCTGGTGCCT CAGCATGGTT TCGATATCGA TTTTATCGAT
ATCAAGGGGG TGCGCGGCAA CGGCCTGATC CGTAAGCTCG CAGCGCCCTT TAAGATCTTG
CGCTCCATCA TGCAGGCGCG TGAGGTGATC AAAGAGTTTA AACCCCATGT GGTGCTCGGC
ATGGGCGGAT TCGCCAGCGG CCCGGGTGGG GTAGCGGCCA AGCTGAGCGG CATCCCTCTG
GTGCTCCATG AGCAAAATGC CATACCAGGC ATGACCAACA AATTGTTGTC ACGCATCGCC
AGCCGTGTGC TGTGCGCCTT CGAAAACACC TTCGAGGGCA ATGCCGAGGT GGTGGGCAAC
CCGATCCGTA GCGAGCTGAT CGCCCTGGGA CGTAGCGAGC AGCCTATCGT TCCGGACGAT
GCTCTTAGGG TGTTGGTGGT CGGCGGCAGC TTGGGTGCCA AGATATTTAA CGACCTGATG
CCGAGCGTGA CGGCGGCCGT GGCCCAGCAC CATTCGATGA CGGTATGGCA TCAGGTGGGC
AAGGGTAATC AGGCACAGGT GGAGGCGGAA TACCTGCAGC TGGGGCAATC CGGCAGCGTC
AAGGTGGCCG AGTTTATCGA TGATATGGAA GCGGCCTATC GCTGGGCCGA TGTGATTCTG
TGCCGTGCGG GCGCCCTGAC GGTGTCAGAG GTAGCGGCGG TGGGGCTACC GAGTCTCTTG
GTGCCTTACC CCCATGCGGT AGACGATCAT CAGACCAAGA ATGCCCAGGT CTTGGTGGAA
GCGGGCGGCG CATTTTTGCT GCCGCAGACA GTATTAGATA GTGAGAAGTT GATCAGCAAG
CTGCAGATCT TGGCGTCAGA CCGTAAGGCC CTCATCGAGA TGGGGCAGCT GGCCAAGAGT
GTTGCCGTAT TAGATGCCAC AGAGCGGGTC GCCGCCGTGT GTATCGCGCT GGCAAGTAAG
GAAAAAGATG ATTAA
 
Protein sequence
MASEKRILIM AGGTGGHVFP ALAVAKALAK QGWQVRWLGT ADRMEARLVP QHGFDIDFID 
IKGVRGNGLI RKLAAPFKIL RSIMQAREVI KEFKPHVVLG MGGFASGPGG VAAKLSGIPL
VLHEQNAIPG MTNKLLSRIA SRVLCAFENT FEGNAEVVGN PIRSELIALG RSEQPIVPDD
ALRVLVVGGS LGAKIFNDLM PSVTAAVAQH HSMTVWHQVG KGNQAQVEAE YLQLGQSGSV
KVAEFIDDME AAYRWADVIL CRAGALTVSE VAAVGLPSLL VPYPHAVDDH QTKNAQVLVE
AGGAFLLPQT VLDSEKLISK LQILASDRKA LIEMGQLAKS VAVLDATERV AAVCIALASK
EKDD