Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3451 |
Symbol | |
ID | 4923376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4132836 |
End bp | 4133600 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640165073 |
Product | cell division protein FtsQ |
Protein accession | YP_001095576 |
Protein GI | 127514379 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1589] Cell division septal protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.188936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000214204 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCCTTAA GAGAGCTAGG TAGCGGTTGG AAAAGCAGGT TGGGACAGGT CGATTGGTAC CTGTGTTTCG GCTTGATTTT TCTGTTCCTG GTGATCTGTG GTTTATCCAT GGGAGGCTGG AAGCTTCACC TGGTACTGAA CGACGCCGAT GCCCTGCCAA TTGAGGCGGT GGCGATCAAG GGTGACAGGC AGTTTACCAG TGACGCCGAG ATACGCAGTG CGCTGCAGGA TCTGATGCAG AGAAGCTTCT TCTCGGCGGA TGTGAATCAG GTACAGCAGG CGCTGGAAAA TCTGCCCTGG GTCTACCACG CCTCGGTGAG ACGCGAGTGG CCGGCAAAGT TAAAGGTGTA TCTGGTGGAG CAGACGCCGG TCGCCCACTG GAACGAGACA GATTGGCTCA ACGAGCAGGG GCAGGTGTTT AAGGCGCCCC ATCGTGAGGG CATAGGCCTG CTGCCTAATC TGGTCGGCCC GGAAGATCAG GCGAAGTCTG TGTTGACTAA CTATCGCCAG GTCAGTGAAC TATTGAAGAT CAACGGGTTC GATTTGGCCC GTTTAGAGTT AAGCCCCAGA CATGCCTGGT TAGCCGTGCT GGCCAACGGC ATAGAGTTGA AGCTGGGAAG GGAAGATAAG ATGGCAAGGG TGCAGCGCTT TATCCATGTG TATCCCACAT TGGTGAAACA GGATAAGCCC GTTGCCCGAG TCGATTTGCG CTACGATACC GGATTGGCCG TAGGTTGGGA TGAAGCACAA GATGAGAGCC GTTAA
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Protein sequence | MSLRELGSGW KSRLGQVDWY LCFGLIFLFL VICGLSMGGW KLHLVLNDAD ALPIEAVAIK GDRQFTSDAE IRSALQDLMQ RSFFSADVNQ VQQALENLPW VYHASVRREW PAKLKVYLVE QTPVAHWNET DWLNEQGQVF KAPHREGIGL LPNLVGPEDQ AKSVLTNYRQ VSELLKINGF DLARLELSPR HAWLAVLANG IELKLGREDK MARVQRFIHV YPTLVKQDKP VARVDLRYDT GLAVGWDEAQ DESR
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