Gene Shew_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3451 
Symbol 
ID4923376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4132836 
End bp4133600 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content55% 
IMG OID640165073 
Productcell division protein FtsQ 
Protein accessionYP_001095576 
Protein GI127514379 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.188936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000214204 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCTTAA GAGAGCTAGG TAGCGGTTGG AAAAGCAGGT TGGGACAGGT CGATTGGTAC 
CTGTGTTTCG GCTTGATTTT TCTGTTCCTG GTGATCTGTG GTTTATCCAT GGGAGGCTGG
AAGCTTCACC TGGTACTGAA CGACGCCGAT GCCCTGCCAA TTGAGGCGGT GGCGATCAAG
GGTGACAGGC AGTTTACCAG TGACGCCGAG ATACGCAGTG CGCTGCAGGA TCTGATGCAG
AGAAGCTTCT TCTCGGCGGA TGTGAATCAG GTACAGCAGG CGCTGGAAAA TCTGCCCTGG
GTCTACCACG CCTCGGTGAG ACGCGAGTGG CCGGCAAAGT TAAAGGTGTA TCTGGTGGAG
CAGACGCCGG TCGCCCACTG GAACGAGACA GATTGGCTCA ACGAGCAGGG GCAGGTGTTT
AAGGCGCCCC ATCGTGAGGG CATAGGCCTG CTGCCTAATC TGGTCGGCCC GGAAGATCAG
GCGAAGTCTG TGTTGACTAA CTATCGCCAG GTCAGTGAAC TATTGAAGAT CAACGGGTTC
GATTTGGCCC GTTTAGAGTT AAGCCCCAGA CATGCCTGGT TAGCCGTGCT GGCCAACGGC
ATAGAGTTGA AGCTGGGAAG GGAAGATAAG ATGGCAAGGG TGCAGCGCTT TATCCATGTG
TATCCCACAT TGGTGAAACA GGATAAGCCC GTTGCCCGAG TCGATTTGCG CTACGATACC
GGATTGGCCG TAGGTTGGGA TGAAGCACAA GATGAGAGCC GTTAA
 
Protein sequence
MSLRELGSGW KSRLGQVDWY LCFGLIFLFL VICGLSMGGW KLHLVLNDAD ALPIEAVAIK 
GDRQFTSDAE IRSALQDLMQ RSFFSADVNQ VQQALENLPW VYHASVRREW PAKLKVYLVE
QTPVAHWNET DWLNEQGQVF KAPHREGIGL LPNLVGPEDQ AKSVLTNYRQ VSELLKINGF
DLARLELSPR HAWLAVLANG IELKLGREDK MARVQRFIHV YPTLVKQDKP VARVDLRYDT
GLAVGWDEAQ DESR