| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3450 |
|---|
| Symbol | |
|---|
| ID | 4923375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 4131597 |
|---|
| End bp | 4132832 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640165072 |
|---|
| Product | cell division protein FtsA |
|---|
| Protein accession | YP_001095575 |
|---|
| Protein GI | 127514378 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0849] Actin-like ATPase involved in cell division |
|---|
| TIGRFAM ID | [TIGR01174] cell division protein FtsA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000166188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000034496 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA ATCAAGATAG AAATCTGATC GTTGGATTAG ACATAGGAAC GTCCAAAGTT
GCTGTGATCA TCGGTGAGGT ACTACCCGAT GGTGAGATCA GTGTGGTCGG TCTCGGCAGT
CACCCCTCCC GCGGTATGGA TAAGGGCGGG GTAAACGATC TCGACTCTAT CGTGCGTAGT
GTACAACGCG CGCTGGATCA GGCCGAGTTG ATGGCCGATT GTCAGGTCGC CTCGGTATAC
CTGGGCATCT CGGGTAAGCA TATCCAGTGT CAGAACGAAA ATGGCATGGT GTCGATTAAC
GACGAAGAGG TGACTCAGGA AGATGTAGAC AACGTCATCC ACACCGCCCG CTCGGTGAAG
ATCCCGACCG AGCGTCGTAT TCTGCACGTC TTGCCACAAG AGTATGCCAT CGACGTACAA
GACGGTATCC GCAGCCCAAT CGGCATGTCG GGTATGCGTA TGGAAGCCAA GGTGCATATC
GTTACCTGCG CCAACGACAT GGCCAAGAAT ATTACCAAGA GTGTCGAGCG TTGCGGCCTG
AAGGTAGATG ACCTGGTGTT TTCGGCCATC GCCTCGGCTG ATGCTGTGCT CACCGACGAT
GAGAAAGACC TTGGCGTCTG CCTGGTGGAT ATGGGCGGCG GCACCACAGA TATCACCATC
TACACCAATG GCGCCCTGCG TCACTGCGCC GTGGTGCCTG TGGCCGGTAA CCAGGTGACC
AGCGATATCG CCAAGATCTT CCGTACGCCG CTGTCACATG CTGAGCAGAT TAAGGTGCAG
TACGCCAGCG CCAGAAGCGC CATGGTGAGC CGCGAAGACA GCATAGAGGT GCCATCGGTC
GGCGGACGTC CGTCGCGCAC CATGTCGCGC CATACCTTGG CCGAGGTAGT CGAGCCAAGA
TATCAGGAGC TGTTCGAGCT GGTGCGTAAA GAGTTGCGCG ACTGCGGCCT GGAAGATCAG
GTTGCCGCCG GTATCGTACT CACGGGCGGT ACCGCATCGA TTGAAGGCGC GGTAGATGTC
GCCGAGGCGA CCTTTGGCAT GCCGGTTAGG GTAGCCGAGC CGTTGCCGGT GAAAGGATTA
TTTGAATATG TGAACCAGCC CATCTACTCC ACGGGTGTTG GGTTGTTACA TTATGGTGCA
AGACGTGTGC TCGAGCGACA GTTCGAGCGC CCCGAGCGCC AAGGGGTGAC CAGTCTTTGG
AATCGGGTCC AGAGCTGGTT TAAGGGTGAG TTTTAA
|
|---|
| Protein sequence | MTKNQDRNLI VGLDIGTSKV AVIIGEVLPD GEISVVGLGS HPSRGMDKGG VNDLDSIVRS
VQRALDQAEL MADCQVASVY LGISGKHIQC QNENGMVSIN DEEVTQEDVD NVIHTARSVK
IPTERRILHV LPQEYAIDVQ DGIRSPIGMS GMRMEAKVHI VTCANDMAKN ITKSVERCGL
KVDDLVFSAI ASADAVLTDD EKDLGVCLVD MGGGTTDITI YTNGALRHCA VVPVAGNQVT
SDIAKIFRTP LSHAEQIKVQ YASARSAMVS REDSIEVPSV GGRPSRTMSR HTLAEVVEPR
YQELFELVRK ELRDCGLEDQ VAAGIVLTGG TASIEGAVDV AEATFGMPVR VAEPLPVKGL
FEYVNQPIYS TGVGLLHYGA RRVLERQFER PERQGVTSLW NRVQSWFKGE F
|
|---|
| |