| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3448 |
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| Symbol | lpxC |
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| ID | 4923462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4129288 |
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| End bp | 4130208 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640165070 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001095573 |
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| Protein GI | 127514376 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000381376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000223856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATTTTTC AAAGAACTGT TAAAGAAATG GTTAAGACCA CCGGTGTCGG ATTGCATTCC
GGTAACAAGG TGACTTTGAC GATCAAACCC GCGCCAGTTA ATACAGGGAT CGTGTTGGTT
CGTACCGACT TGACGCCAAG CGTGGCCATT GCCGCCAAGG CGGATCAAGT GCGTGAGACG
ACCATGTGTA CGGCGCTTGT GAATGACGAA GGTGTTCGTA TCTCAACGAT TGAGCATCTG
TTTGCCGCCC TGGCAGGTTT AGGCATAGAC AACGCGACAA TCGAAGTCGA TGCCCCTGAG
ATCCCCATTA TGGATGGCAG CGCCAGCCCA TGGGTCTTCC TGTTGCAATC TGTCGGCATT
CAGGAGCAAA GCGCAGCAAA GAAATATCTA AGAATCAAGC GCCCTGTGCG TGTTGAAGAT
GGTGATAAGT GGGCCGAACT GCGTCCATTC AAGGGTTTCC GAGTCGATTT CGCGATCGAT
TTTAATCACC CTGAGATCGC CAGAAGTCAG CAGCATATGG TGATGGATTT TTCCTCTTCT
GCCTTCGTTC GCGATATCAG CCGCGCCAGA ACCTTTGGGT TTATGCGCGA CATCGAATAT
CTGCGTGCCA ATAACCTGGC ATTAGGTGGC AGCATGGAAA ATGCCGTTGT GCTTGATGAA
TACCGCGTCC TCAACCCCGA TGGTCTGCGT TATGAGGACG AGTTTGTTAA GCACAAAATT
CTCGATGCGT TCGGTGATCT CTATGTCGCC GGTCACGCTA TCGTCGGTGA ATTCCGTGCG
TTCAAAACAG GCCACGCGCT GAACAATCAG CTGGTTCGTG CCCTGTTAGC CGAGCAAGAT
GCTTGGGAAT TGGTAAGCTT CGAGAAAGAA GAAGAGGTAC CAGTCAGTTT CGCCGTGCCT
GCGGGTGCGG TATTGGCGTA A
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| Protein sequence | MIFQRTVKEM VKTTGVGLHS GNKVTLTIKP APVNTGIVLV RTDLTPSVAI AAKADQVRET
TMCTALVNDE GVRISTIEHL FAALAGLGID NATIEVDAPE IPIMDGSASP WVFLLQSVGI
QEQSAAKKYL RIKRPVRVED GDKWAELRPF KGFRVDFAID FNHPEIARSQ QHMVMDFSSS
AFVRDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI
LDAFGDLYVA GHAIVGEFRA FKTGHALNNQ LVRALLAEQD AWELVSFEKE EEVPVSFAVP
AGAVLA
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