Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3447 |
Symbol | |
ID | 4923461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4128829 |
End bp | 4129284 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640165069 |
Product | hypothetical protein |
Protein accession | YP_001095572 |
Protein GI | 127514375 |
COG category | [S] Function unknown |
COG ID | [COG4701] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000038127 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000018391 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAAAGC CCCCGCAGGA CCTCAGTCAA TTACTGCTTC AGCAGGGTCA ATTGCCCTCT ATCGCCGAAA AAGCAGAACT ACTGCTTCAC CTGGATCACC ATGTTAAACA GGTGATCACC GGTCCTGTCT CGGAACAACT AAAAGTCGCC AACTTCCGTC AAGGTGTGCT CGTTATCGAA ACCAGTACCG CCGCATGGGC CGCAAGAATA AACTTCCAAA AACCCAAACT TTTACAGCAG TTACAAGCCG AAACGCTCCC CATGCTGTCC GCTATCGAGG TTAAAGTCAA CCCAAGCCTG AAAATGTATG AGACAAAATC AAAGCAGGCT CACAACCAGA TAAGCGAAAC CGCTGCGGCG CATATCGACG CCTTGGCCGA GCATATAGAA GGTTCCCTAG GCCAAAAACT AAAACGGCTG GCTGCTTTAG CCAGCCGTTC AAGGCAATCC AAATAG
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Protein sequence | MKKPPQDLSQ LLLQQGQLPS IAEKAELLLH LDHHVKQVIT GPVSEQLKVA NFRQGVLVIE TSTAAWAARI NFQKPKLLQQ LQAETLPMLS AIEVKVNPSL KMYETKSKQA HNQISETAAA HIDALAEHIE GSLGQKLKRL AALASRSRQS K
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