| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3435 |
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| Symbol | |
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| ID | 4923449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4101353 |
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| End bp | 4102234 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640165047 |
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| Product | nicotinate-nucleotide pyrophosphorylase |
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| Protein accession | YP_001095560 |
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| Protein GI | 127514363 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0128506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.402549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAA ATGACATTAG ATTAGCCGTC AAAGTCGCAC TCGAAGAAGA TTTAGGTTTT
CAGGCCGATT CAAATCTTAC TGCCGAAGAA AAGTTAAGTC TGGATATCAC GGCTCAGCTT
ATTCCTAGTG ATAAGTATGC GCAGGCTAGC TTGATCACCC GCGAAGAAGG GGTCTTTTGT
GGTAAGGCCT GGGCAGAACA AGTCTTTAAC CAGCTAGGTG GTGAAGTTGC CTTACATTGG
CATGTGGACG ATGGCGATCT CGTCTTACCG AACCAAGTGC TTTGTGAAAT GTCAGGTTCG
GCCCGTGCCA TCCTGACCGG TGAGCGCACC GCGATGAACT TCATCCAGAC ACTATCAGGC
GTTGCCACCC TAACCAAACT CTATGTCGAC AGACTGGCGG GCACCCACTG CAAGCTATTA
GATACCCGCA AGACGATTCC AGGTCTGCGC ACGGCGCAAA AATATGCCGT CACCTGCGGT
GGTGGCAAGA ACCATCGTAT CGGCTTGTTC GATGCCTTCC TGATCAAGGA AAATCACATC
ATGGCCAGTG GCTCAATTGC CTCTGCCATT AATGCCGCCC GCCAGCTTGC CAGCGATAAG
CTAGTGGAGG TCGAAGTCGA AAGCATAGAC GAACTCAAGC AGGCACTCGA TGCCGGCGCC
GATATCGTCA TGCTCGACAA TTTTGACGTC ACCATGATGA TAGAGGCGGT AGAGCTAAAT
AATAGCTATA ACGAAAACCA GCGTGTAAAA CTCGAGGTAT CGGGCAACGT GACGCTAGAC
ACCATCTCAG ATTATGCCAA GACAGGCATA GACTACATTT CAGTCGGCGC CCTCACTAAG
CACGTCAAGG CGCTGGATTT GTCGCTACGA CTCAAAGACT AG
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| Protein sequence | MLENDIRLAV KVALEEDLGF QADSNLTAEE KLSLDITAQL IPSDKYAQAS LITREEGVFC
GKAWAEQVFN QLGGEVALHW HVDDGDLVLP NQVLCEMSGS ARAILTGERT AMNFIQTLSG
VATLTKLYVD RLAGTHCKLL DTRKTIPGLR TAQKYAVTCG GGKNHRIGLF DAFLIKENHI
MASGSIASAI NAARQLASDK LVEVEVESID ELKQALDAGA DIVMLDNFDV TMMIEAVELN
NSYNENQRVK LEVSGNVTLD TISDYAKTGI DYISVGALTK HVKALDLSLR LKD
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