| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3431 |
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| Symbol | aceE |
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| ID | 4923511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4095881 |
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| End bp | 4098547 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640165043 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_001095556 |
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| Protein GI | 127514359 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.771222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC ATATGCTGCA AGATTTAGAT CCGTTAGAGA CTCAAGAGTG GGTCGATTCA
TTACAAGCCG TATTAGAGCA AGAAGGTCCG GAACGTGCTC ATTTTCTTCT TGAGAAACTA
ATCGACAAGG CTCGTCGTAA CGGTACACAT CTGCCTTATA AGGCGACCAC CGCCTACCTC
AACACGATTC CTGCCGGTCA GGAACCTCAT ATGCCAGGTA ACCAAGAGAT GGAGCGTCGC
ATTCGCGCCA TCATTCGTTG GAACGCCTTG GCCATGGTAC TGCGTGGTTC GAAGAAAGAT
CTTGAGCTGG GTGGCCACAT TTCCAGTTTC GCCTCTAGTG CAACCATTTA CGATGTTTGC
TTCAACCACT TCTTCCGTGC GCCAAACGAG AAGGATGGTG GTGACCTGGT TTACTTCCAG
GGTCATATCG CTCCTGGTAT CTATGCGCGC TCTTTCCTCG AAGGTCGCCT GACCGAAGAT
CAACTGGCTA ACTTCCGTCA GGAAGTGGAC GGCAAGGGTC TATCATCTTA CCCGCACCCT
AAGTTGATGC CTGACTACTG GCAGTTCCCA ACAGTTTCTA TGGGTCTGGG TCCTATCCAG
GCTATCTATC AGGCACGTTT CCTGAAATAC CTGACCGACC GTGGTCTGAA AGATTGTTCT
GAGCAAACCG TATACTGCTT CTTGGGTGAT GGTGAGTGTG ACGAGCCAGA AACGCTAGGT
GCTATCGGTC TGGCCGCTCG TGAAGAGCTG GACAACCTGG TCTTCATCGT TAACTGTAAC
CTGCAGCGTC TAGATGGTCC TGTACGTGGT AACGGCAAGA TCATTCAAGA GCTTGAAGGC
GAATTCCGCG GCGCTGGCTG GGAAGTGGCT AAGGTCATCT GGGGTCGCTA CTGGGATCCG
CTATTGGCTC GCGACACCAG CGGTAAGCTG CTGCAGCTGA TGGAAGAAAC CGTCGACGGC
GAATACCAAA ACTGTAAGGC CAAAGGTGGC GCTTATACCC GTGAGCACTT CTTCGGTAAG
TACCCTGAAA CGGCCGAGAT GGTTGCTAAC ATGTCTGACG ACGACATCTG GCGCCTCAAC
CGTGGTGGTC ACGATCCAGT GAAGATCTAT GCCGCGCTGC AACACGCTAA GAACACTAAG
GGTCGTCCAA CCGTAATCCT GGCTAAGACA GTTAAAGGTT ATGGTCTTGG TGATGCCGGT
GAAGGTAAGA ACATCGCGCA CAACGTTAAG AAGATGGACA TCAGCGCCGT ACGTTACTTC
CGCGATCGCT TCAATATCCC TATCCCTGAC GACAAGCTAG AAGAGATCCC TTTCTATCAC
CCAGGTCCAG ATTCGGAAGA GGTGAAGTAC CTTCAGGAAC GCCGCGCCGC GCTGCACGGT
TCTATGCCTG CTCGCCGTCA GAAGTTCAGT GAAGACCTCG AAGTGCCTTC ACTGAAGATC
TTCGACTCTA TCCTCAAGGG CTCTAACGGT CGTGAGATCT CAAGCACAAT GGCGTTCGTC
CGTATTCTGA CTGCGCTGCT GAAAGATAAG AAGATAGGTA AGAACATTGT CCCTATCATC
CCGGATGAGG CGCGTACCTT CGGTATGGAA GGTCTGTTCC GTCAGGTGGG TATCTATGCT
CACGAAGGAC AAAAGTACGT ACCACAAGAC TCGGATCAGG TGGCTTACTA CCGCGAAGAC
AAGTCGGGCC AGGTACTGCA AGAGGGTATC AACGAGCTAG GCGCCATGTC TTCTTGGGTG
TCAGCGGCGA CCAGCTACTC GGTTAACGAT ACGCCAATGA TCCCATTCTA CATCTACTAC
TCTATGTTTG GTTTCCAACG TATCGGCGAC ATGGCATGGG CGGCAGGTGA TATGCGTGCT
CGTGGCTTCA TGGTTGGTGG CACGTCAGGC CGTACTACCC TGAACGGCGA AGGTCTGCAG
CACCAGGATG GTCACAGCCA CGTATTGGCT AACACTATTC CTAACTGTAT CTCTTACGAC
CCGACCTATG GTTATGAGAT TGCAGTTATC GTTCAAGACG GTATCCGTCG CATGTATGGC
GAAAACCAGG AAGATATCTT CTACTACCTG ACCACGATGA ATGAAAACTA TGTTCAGCCT
GAGATGCCAG AGGGTGCCGA AGAAGGTATC GTCAAGGGTA TCTACAAGCT GGAATCAGTG
TCTGGTAGCG GCAAGGGTAA GGTACAGCTA ATGGGCTGTG GCACCATCCT TGAACAAGTT
CGTAAGGCGG CGCAGGCGCT GGCGAAAGAC TTCGGTATCT CGTCAGACGT ATTCAGCGTG
ACCAGCTTCA ACGAGCTGAC TCGCGACGGT CAGGCGGCAG AGCGTTACAA CATGCTGCAC
CCAACCGAAA CGCCTAAGCA GGCTTATATC AGCCAGGTGT TGTCTAGCGA TTCTCCAGCC
GTTGTTGCCA CCGACTATAT GAAGATATAT GGCGAGCAGC TACGCGCCTA TGTTCCTACC
GATTACAAGG TGCTGGGTAC CGACGGTTTC GGCCGCAGTG ACAGCCGCGA GAACCTGCGT
CACCACTTCG AAGTGGATGC CAAGTTCATC GTGATCGCCG CACTGAAGTC GCTGGTTGAC
CGCAACGAGT TGCCAGTTGA AGTACTCTCG CAAGCAATTG CCGAGTACGG CATCGATGTT
GACAAGATCA ACCCACAGTT CGCGTAA
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| Protein sequence | MSEHMLQDLD PLETQEWVDS LQAVLEQEGP ERAHFLLEKL IDKARRNGTH LPYKATTAYL
NTIPAGQEPH MPGNQEMERR IRAIIRWNAL AMVLRGSKKD LELGGHISSF ASSATIYDVC
FNHFFRAPNE KDGGDLVYFQ GHIAPGIYAR SFLEGRLTED QLANFRQEVD GKGLSSYPHP
KLMPDYWQFP TVSMGLGPIQ AIYQARFLKY LTDRGLKDCS EQTVYCFLGD GECDEPETLG
AIGLAAREEL DNLVFIVNCN LQRLDGPVRG NGKIIQELEG EFRGAGWEVA KVIWGRYWDP
LLARDTSGKL LQLMEETVDG EYQNCKAKGG AYTREHFFGK YPETAEMVAN MSDDDIWRLN
RGGHDPVKIY AALQHAKNTK GRPTVILAKT VKGYGLGDAG EGKNIAHNVK KMDISAVRYF
RDRFNIPIPD DKLEEIPFYH PGPDSEEVKY LQERRAALHG SMPARRQKFS EDLEVPSLKI
FDSILKGSNG REISSTMAFV RILTALLKDK KIGKNIVPII PDEARTFGME GLFRQVGIYA
HEGQKYVPQD SDQVAYYRED KSGQVLQEGI NELGAMSSWV SAATSYSVND TPMIPFYIYY
SMFGFQRIGD MAWAAGDMRA RGFMVGGTSG RTTLNGEGLQ HQDGHSHVLA NTIPNCISYD
PTYGYEIAVI VQDGIRRMYG ENQEDIFYYL TTMNENYVQP EMPEGAEEGI VKGIYKLESV
SGSGKGKVQL MGCGTILEQV RKAAQALAKD FGISSDVFSV TSFNELTRDG QAAERYNMLH
PTETPKQAYI SQVLSSDSPA VVATDYMKIY GEQLRAYVPT DYKVLGTDGF GRSDSRENLR
HHFEVDAKFI VIAALKSLVD RNELPVEVLS QAIAEYGIDV DKINPQFA
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