| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3429 |
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| Symbol | |
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| ID | 4923509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4092336 |
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| End bp | 4093763 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640165041 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001095554 |
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| Protein GI | 127514357 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0358795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACG AAATCAAAAC TCAGGTAGTG GTTTTAGGTG CAGGCCCTGC AGGTTATTCA
GCAGCATTCC GTGCTGCCGA CTTAGGCCTG GAGACTGTTA TCGTAGAACG TTTCAGCACC
CTAGGTGGTG TGTGTCTGAA CGTGGGTTGT ATCCCATCTA AGGCACTGCT GCACGTTTCA
AAGGTGATCG AAGAAGCTAA GGCCATCTCA AACCACGGTG TGGTATTTGG CGAGCCACAG
ATCGATCTCG ATAAGCTACG TGAGTTTAAG CAGAGTGTTA TCAGCCAGCT GACCGGCGGT
CTTGGCGGCA TGTCTAAGAT GCGTAAAGTG AACGTGGTTA ACGGCCTGGG TAAGTTCACC
GGTCCTAACA CCATCGAAGT TGCCGGCGAA GACGGCGTGA AAGTGGTTCA CTTCGAGCAA
GCGATCATCG CTGCGGGTTC TCGTCCAATT CAACTGCCTT TCATTCCTCA TGAAGATCCA
CGCATCTGGG ATTCGACCGA TGCGCTTGAG CTGAAAGAAG TGCCTGGCAA GCTGCTGGTC
ATGGGCGGCG GTATTATCGG TCTTGAGATG GGTACCGTTT ACTCATCACT GGGTAGTGAA
ATCGACGTGG TTGAGATGTT CGACCAGGTT ATCCCTGCTG CCGATAAAGA TATCGTTCGC
GTCTACACCA AGAAGATCAA GAACAAGTTC AACCTGATCC TTGAGACCAA GGTGACTGCC
GTTGAAGCGA AAGAAGACGG TATCTATGTC TCTATGGAAG GCAAGAAGGC ACCGACCGAG
CCAGTGCGTT ACGACGCAGT ATTGGTGGCT ATTGGCCGTA CACCTAATGG CAAGCTGATC
GACGCCGACA AGGCTGGCGT AAACATCGAT GAGCGCGGTT TCATCAATGT CGACAAGCAG
ATGCGCACCA ACGTGCCACA CATCTATGCT ATCGGTGACA TCGTGGGTCA GCCTATGCTG
GCACACAAAG GTGTGCATGA AGGCCACGTC GCTGCCGAGG TGATTGCTGG CATGAAGCAC
TACTTCGATC CTAAGGTGAT CCCATCAATC GCCTACACAG ATCCTGAAGT GGCTTGGGTT
GGTCTGACCG AGAAAGAAGC TAAAGAGCAA GGCATCGCTT ACGAGACAGC AAGCTTCCCA
TGGGCGGCGA GTGGTCGTGC AATCGCCTCT GATTGCTCAG AGGGTATGAC TAAGCTGATC
TTCGATAAGG AAACTCATCG CGTGATCGGT GGTGCTATCG TGGGTGTTAA TGGTGGCGAG
CTGCTGGGTG AGATCGGTCT GGCTATCGAG ATGGGTTGTG ATGCCGAAGA TCTGGCATTG
ACCATCCACG CTCACCCAAC ACTGCATGAG TCTGTTGGTC TAGCGGCTGA GATCTACGAA
GGTTCAATTA CCGATTTGCC TAACCCTAAG GCAAAGAAGA AAAAGTAA
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| Protein sequence | MSNEIKTQVV VLGAGPAGYS AAFRAADLGL ETVIVERFST LGGVCLNVGC IPSKALLHVS
KVIEEAKAIS NHGVVFGEPQ IDLDKLREFK QSVISQLTGG LGGMSKMRKV NVVNGLGKFT
GPNTIEVAGE DGVKVVHFEQ AIIAAGSRPI QLPFIPHEDP RIWDSTDALE LKEVPGKLLV
MGGGIIGLEM GTVYSSLGSE IDVVEMFDQV IPAADKDIVR VYTKKIKNKF NLILETKVTA
VEAKEDGIYV SMEGKKAPTE PVRYDAVLVA IGRTPNGKLI DADKAGVNID ERGFINVDKQ
MRTNVPHIYA IGDIVGQPML AHKGVHEGHV AAEVIAGMKH YFDPKVIPSI AYTDPEVAWV
GLTEKEAKEQ GIAYETASFP WAASGRAIAS DCSEGMTKLI FDKETHRVIG GAIVGVNGGE
LLGEIGLAIE MGCDAEDLAL TIHAHPTLHE SVGLAAEIYE GSITDLPNPK AKKKK
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