| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3426 |
|---|
| Symbol | |
|---|
| ID | 4923506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 4083244 |
|---|
| End bp | 4085298 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640165038 |
|---|
| Product | endothelin-converting protein 1 |
|---|
| Protein accession | YP_001095551 |
|---|
| Protein GI | 127514354 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3590] Predicted metalloendopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000894616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TCAGTCATTT GGCATTAGCC GTGGCGTTGG GCTTGGGCCT AGGCGCCTGT
GGTAGCCATG ACACCACTCA GGTAGAGAGT GTACAAGCGA CAAAGGTGTC GGGCGTTGAG
AAGGAAAACT TCGACACTCA GGTGCGTCAT CAGGACGATT TCTATTACAG CGTTAACGGT
CACTGGTTGG CGAACACGCC GATCCCTGCC GACAAGTCTA ACTACGGCGC CTTCTCTGTG
CTGTATGAGC AGAGCCAGAA TGCCCTGAAA GAGATCATCG ACGAAGTGGC CGCCATGCCA
AATAAGGCCG AAGGCTCTAA CGAGCAGAAG GTGGGTGACT TCTACGCCAG TTACATGAAT
ACCGACCTGG TCGAGCAGCT GGGTGTGACG CCGATTAAGG CGCCTATGGC TGAGATCGCC
GGCCTCAAGA GCCATCAAGA CGTTGCCAAC CAGATGGGTA AGCTGCTGGT CTCTGGCGTG
CAGATGCCAC TGGGCTTCTA TGTGAACAAC GATGCCAAGA AGTCGACCCA GTATGGCGTC
TACTTCTACC AGTCTGGTTT GACCCTGCCG GATCGCGACT ACTACCTGAA AGACGATGCT
AAGTTCGTGG CTAACCGCGC CGCGCTGCAG AGCTATGTGA CGGATCTGTT GGCTGCTGCC
GGTTACGCGA ATGCCGAGCG CGCCGCGAAC AACGTGGCCG AGATCGAGCG CTTCCTGGCC
GAGAGCCAGT GGACGCGCAC CGAGTCACGT GACGCCAACA AGAGCTACAA CAAGATGGAT
ATCGCTGGTC TGCAGAAGAC AGTCAGCAAC TTCGATTATT CACAGTTTGC TAACGGCGCC
GACATGAACA AGGTTACCGA GGTGATCGTG CGTCAGCCCT CTTTCTTCGA GAAGTTTGGC
AAGCAATTTA ACCAGTTCAG CGTCGAGCAG TGGCAAGACT ACTTGATGTT CCACCTGGTG
GACAGCTCCG CCGAGCTGCT GAACAAGCAG ATGGTCGATC TGCACTTTGC CTTCCACAGC
AAGACGCTGA TGGGCATCGA AGAGCAGAAG CCGCGCTGGA AAAAAGCGGT AGATGCTGCG
GATCAGGTGA TCGGTGAGCT GGTGGGTCAA GAGTACGTTA AGCGTCACTT TAAGCCAGAA
GCCAAGGCGC GCATGGAGAA GATGATCCAT AACCTGATCA AGGGCTTTGA GGTCAGCATC
AACGAGCTCG AGTGGATGAC ACCTGAGACT AAGGTGGCGG CGCAAGAGAA GCTGTCTAAG
TTCAACTACA AGATCGGCTA CCCAGACAAG TGGAAAGACT ACACAGATCT GAGTATCAAG
GCCGATGATC TCGTGGGTAA CTATCTGCGT TACGCTCACT TCGAATACAA GACCATGCTG
GACAAGCTAG GTAAGCCAAT CGATCGCACC GAGTGGCACA TGACGCCGCA GACGGTTAAC
GCTTACTACA GTCCTGTGAT GAATGAGATC GTCTTCCCGG CCGCGATTCT GCAGCCGCCG
TTCTTCAACA TGGATGCCGA CGATGCGATC AACTATGGTG GCATCGGCGC TGTGATCGGC
CACGAGATCA GCCATGGTTT CGATGACCAG GGCGCCAAGT ATGACGGTGA CGGCAACCTG
AGAGACTGGT GGTCTGACAA AGACAGAGAA GAGTTCAAGA AGCGCGGTGC TCAGCTCAGC
GCTCAATACT CTGGCTATGA AGCCCTGCCA GGTAAGTTTG TTAATGGCGA CCTCACACTG
GGTGAGAACA TCGGTGACCT GGGTGGTCTG ACCGTGGCAG CGCGCTCTTA TCAGCTGAGC
CTAAACGGTA AAGAAGCGCC AGTGATCGAT GGCCTGACCG GCGAGCAGCG TCTGTTCATC
GGCTGGTCAC AGGTATGGCG TCGTAACTAT CGCGACGAAG AGCTGGGACG TCGTCTACTG
ACCGATCCGC ACTCACCAAG CCACTTCCGT GCCATGGGTA CGCCGCGTAA CATCCCAGCC
TTCTACGAGG CGTTCGATGT TAAGGCCGGC GACAAGATGT ACCTGAGCGA AGAAGATCGC
GTGAAGATCT GGTAA
|
|---|
| Protein sequence | MKKVSHLALA VALGLGLGAC GSHDTTQVES VQATKVSGVE KENFDTQVRH QDDFYYSVNG
HWLANTPIPA DKSNYGAFSV LYEQSQNALK EIIDEVAAMP NKAEGSNEQK VGDFYASYMN
TDLVEQLGVT PIKAPMAEIA GLKSHQDVAN QMGKLLVSGV QMPLGFYVNN DAKKSTQYGV
YFYQSGLTLP DRDYYLKDDA KFVANRAALQ SYVTDLLAAA GYANAERAAN NVAEIERFLA
ESQWTRTESR DANKSYNKMD IAGLQKTVSN FDYSQFANGA DMNKVTEVIV RQPSFFEKFG
KQFNQFSVEQ WQDYLMFHLV DSSAELLNKQ MVDLHFAFHS KTLMGIEEQK PRWKKAVDAA
DQVIGELVGQ EYVKRHFKPE AKARMEKMIH NLIKGFEVSI NELEWMTPET KVAAQEKLSK
FNYKIGYPDK WKDYTDLSIK ADDLVGNYLR YAHFEYKTML DKLGKPIDRT EWHMTPQTVN
AYYSPVMNEI VFPAAILQPP FFNMDADDAI NYGGIGAVIG HEISHGFDDQ GAKYDGDGNL
RDWWSDKDRE EFKKRGAQLS AQYSGYEALP GKFVNGDLTL GENIGDLGGL TVAARSYQLS
LNGKEAPVID GLTGEQRLFI GWSQVWRRNY RDEELGRRLL TDPHSPSHFR AMGTPRNIPA
FYEAFDVKAG DKMYLSEEDR VKIW
|
|---|
| |