| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3414 |
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| Symbol | |
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| ID | 4923568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4066298 |
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| End bp | 4069300 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165026 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095539 |
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| Protein GI | 127514342 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.789189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATACT TCATCCTGTT GTTCACCCTA TTACTCACCG CTTGTGGCGG AGGCGACTCG
GACAGTCCTG CACCGCAAGC CGAAAAACAA GCGCACCCTG GCATTCAGGT TCAGGAACTG
GTGCAAACCT ATGCGCCAGA TCAGCGCCTC ACCCCGGCCA TCACGGGCAA GTTAGGCAGC
ATCAGCTATC AATTGGTTAA CGGCGCCCCA GCCGATGTGG TCAAGATCTC TGCCGACAAG
CAGTATCTCG CTATCCTCAA TGCCGGCACC ACAGAACTGA TCGCCACAGA TAGCGGCAAC
AGCCAGACCA AGCCGGTCAG CCAACGTTTT AGCATCAGCA TCAATAAGGC ACCTCGCACG
CCGCTACTGA CTAACGATAT CAGCCAGGGC TATGTCGCCG GCGCCCAGCT CTCTCCTAGC
ATCAGCGGTG TCAAAGGCAG CCTCAGCCTG ATGCTGGCCG AGGATCAGCC CGCAAACGTG
GTGACAGTCG ACGCCCAGGG TAAGATCACT GTGCTAGGCA GCGGCAGCGT GAAGCTGCTA
GCCAAAGATG ATGGCGGTCG TAACTTCCAG GCCGACTCAC GCGAGTTTCA AATCAACATC
TCGCCTGCCG AGACCGCCTA CGCCACTTAT CAGGATATCG CAGGCAAGCC ACTGATCTTT
GGCGGTAAGC TACTGCCCGT CTACAGCGGC ACGCCCACCA CAGAGGCTCA CTACCAGCTG
GTTGCTGGCG CCAATACTCA GGTAGTTCAG GTGCATCCCA CCACAGGGGC AATGAACATA
CTTGGCGCCG GTGAGACCCA GGTTGAGGTG CAGCAAGTCG CGCCGGCCAA CCATACTCAG
GTTCCAGTTC AACGCTTTAG CATTCAGGTC GACAAGGCGC AGAACCTAGC GTTCAAGGCA
AGCGATGTCA CCACACGTTT CGACGCCGAT AAGACGGCGA GCTTCGATGT CACCGGCGTC
CAGGGTAAGC TGCACTACGC CATTAAGGCG GGCGCGGCCG AGGATGTCAT CAGTATCACA
GATGCCGAGC TGGGTGAGTT TAGCTTCCAG GGCGTCGGCG AGACAGAAGT CGAGGTAACC
GACGCCGGTA ACCACAACTA CCTGAGCGCG ACTCGCGCCT TCAAGGTCAA GGTCGAGGCC
ATGATCGCCA GCTCTCTGCA GGCTATCGAT ATCGATACTC AATATCAGGC CAATCAAAGC
CTGACGCCGC AAGTTGTCGG TGCCAAGGGC AAGCTGAGCT ATAGCCTGAC CGCCAGCAGT
GCCACCGATG TGGTCACACT GGACAGCAAA ACCGGCCAGA TGCAGGTGTT GAAGCCTGGC
ACGGTAGCGG TCATCGTTAA AGATGATGGC GGCGAGCTGT GGACGGCGCA ATCGCAGCAG
TTCACTGTCA CCATCACCAA ACAGGATAAC AGCCTGTTCG TGGTGGAAAA TAGCCGTGTG
GACTTTGCCG CAAACGCAAC CTTCGTCCCT CAACCCAGTA ATAATCAGGG CCAGGTCAGC
TACCAGGTTG ACAATGGCGG TGACGGCGTC TTCAACCAGG ATCCCGATAC CAAGGCGATC
ACTATCATCG GCGCAGGCCG AGGCTGGATC ACCGCAACAG ATGCAGGCAA TGACTTCTAT
CATCCCGCCA GCAGCCGTTT CTTCGTCGAT GTGGCGCCGC TATACGGTAG TCTGCAAATA
TCGTCCGTCC GTAGCCAATA TGCGCCGGGC AAGGTGCTCA CTATTCCCAT GTCGGGCGTC
GTCGGCAGCC TGAGTCTGAA GCTACATAGC GGTCAGAGTG ATGTGGTCGG TGTCGACCTA
GCCAACAAGA CCCTGACGGT TAAGAACGCG GGCAGCGTCA CCTACATAGT GACAGACAGC
GGCGATGCCG GTCATCTATC GCAGAAGGCC GAGCTAAATG TAGTGATCGA CAAGGGAGCC
GAAAACCCTG AACTGGCACT CTCAAGCGAG TTGATCAGCG CGGTATACAG TGCTGGCACC
AAGCTCAAGG CTCCAGGTGT CAGCGGTCGC GGTGTCGACA GTCAGCTCAG CTACTATGCA
GATCTTTCGT CCAGCAAGGT GGTTAGCCTG AACGAGACGA CAGGCGAGAT GACGGTGCTG
GCGGCTGGCA CGGCTAAGGT CACGGTTATC GAGCAGAGCC GTAACTACGA GCGCACCCGG
CGCGACTTTA ACGTCAGCGT GGCCAAGGCG GCTCACCCCG GCCTCAGCCT GGATGAGATC
ACTCAATCAG TGGTCTACTA CCCGGACCGC AAGGTGTTAC CGCCAGAGTT TACCAACGCC
TTTGGTAACC TCACCTATGC CTTCGGCCTA CAGGTATCAC CCGAGTATGC CGAGCTCACC
TCGACGGGCG AACTCACCCT GCATGCCTAT CCACGTTCTG GCGATAACGA CTACTTCGAC
ATCATAGTCA CCGACGATGG CGGCAACAAT TATCAGAGCA CCAGCCTGAA CTACAAGCTG
TTCCTCAAGG ATATCGAGCC AGGCCTTGGC GAAGAAGCCA GCCTGACCTT CGATGGCAGC
GAGCTGCAGC TAGTCTCTCC GGCAGAGGTT GCCGCGGGCG ATGTATCCTA CTTCACCGCC
ATCGGTGGAC GCGGTGACGC CATCAGCAAG GATGACGACG ATGAACTGAG TGGTGGCTAT
ACCACTATGC TGACACAGGT GTGTACCGAC CCGGACAATT ACAAGGGCTG CACCTTTATC
ACCCTGAGGC TGCAAAACAC CAGCCTGTGT AGTGACGGCA GTCGAGTCGC CTATCCGCTG
GCTTCCAGCA GTCGCTACAC CTGCCCAGGC CTGAGCCAGC CGGTCAGCTC CGAGGTCAGC
ATCAGCATGC ATAGCGACGA TCCTTACAAC GCCTGGTTCG TTAATCCAGG ACGTTTTAAG
ACCCTCAAGC CGATTGTGGT GACTCATTTT GCCAAGCCAT ATCGCAGCGG CGACATGGTC
GAGGCGGGTG ACATTCAGGC CAGAGCCTGG TGGCTGATCA ACCTGGATAT CACCAAGGAA
TAA
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| Protein sequence | MRYFILLFTL LLTACGGGDS DSPAPQAEKQ AHPGIQVQEL VQTYAPDQRL TPAITGKLGS
ISYQLVNGAP ADVVKISADK QYLAILNAGT TELIATDSGN SQTKPVSQRF SISINKAPRT
PLLTNDISQG YVAGAQLSPS ISGVKGSLSL MLAEDQPANV VTVDAQGKIT VLGSGSVKLL
AKDDGGRNFQ ADSREFQINI SPAETAYATY QDIAGKPLIF GGKLLPVYSG TPTTEAHYQL
VAGANTQVVQ VHPTTGAMNI LGAGETQVEV QQVAPANHTQ VPVQRFSIQV DKAQNLAFKA
SDVTTRFDAD KTASFDVTGV QGKLHYAIKA GAAEDVISIT DAELGEFSFQ GVGETEVEVT
DAGNHNYLSA TRAFKVKVEA MIASSLQAID IDTQYQANQS LTPQVVGAKG KLSYSLTASS
ATDVVTLDSK TGQMQVLKPG TVAVIVKDDG GELWTAQSQQ FTVTITKQDN SLFVVENSRV
DFAANATFVP QPSNNQGQVS YQVDNGGDGV FNQDPDTKAI TIIGAGRGWI TATDAGNDFY
HPASSRFFVD VAPLYGSLQI SSVRSQYAPG KVLTIPMSGV VGSLSLKLHS GQSDVVGVDL
ANKTLTVKNA GSVTYIVTDS GDAGHLSQKA ELNVVIDKGA ENPELALSSE LISAVYSAGT
KLKAPGVSGR GVDSQLSYYA DLSSSKVVSL NETTGEMTVL AAGTAKVTVI EQSRNYERTR
RDFNVSVAKA AHPGLSLDEI TQSVVYYPDR KVLPPEFTNA FGNLTYAFGL QVSPEYAELT
STGELTLHAY PRSGDNDYFD IIVTDDGGNN YQSTSLNYKL FLKDIEPGLG EEASLTFDGS
ELQLVSPAEV AAGDVSYFTA IGGRGDAISK DDDDELSGGY TTMLTQVCTD PDNYKGCTFI
TLRLQNTSLC SDGSRVAYPL ASSSRYTCPG LSQPVSSEVS ISMHSDDPYN AWFVNPGRFK
TLKPIVVTHF AKPYRSGDMV EAGDIQARAW WLINLDITKE
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