| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3410 |
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| Symbol | |
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| ID | 4923564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4060864 |
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| End bp | 4062288 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165022 |
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| Product | permease |
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| Protein accession | YP_001095535 |
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| Protein GI | 127514338 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTAT CTAATTTTAT CGATCTCTTT CTCGATTCCG CGCCCTGGCT GCTGCTGGGT
CTGGTGCTTG CCGGTATGTT GAAGATGTTT GTGCCCATGA CCTGGATGCA GAAGCAGCTG
GGCGGTCACG GGGTCAAGAC CACTATCAAG GCAGCTGTGT TAGGCGCGCC CTTGCCGCTC
TGCTCCTGCG GGGTGATCCC TGCCGCCGTC GGCCTGCGCC GCTCGGGCGC CTCTAAGGCC
GCCACCACCT CATTCTTGGT GTCCACCCCT GAGACAGGCA TCGACTCTGT AAGCGTCTCC
TACGTGCTGC TTGGCCCCTT CATGGCGGTT GTCAGACCCA TAGCTGCGGT CACCAGCGCC
ATTGTCGCCG GCCTGCTGGT GGGACGTGAC GATGATGAAG CCAAGGCTGC CGAAGTAGCT
CATTCGGCCG GTTCTAAACG AGATGAGGCA GACAAGGCTG AGGCGAGCAG CAGTTGCTGT
AGCAGTAAGC CAGCTCAAAA GTCGCTCGAA AAGGCTGAGT CATCGAGTTG CTGTGGTGAC
AAGCCGAGTG CGCCTGTGCG TATGACGACG GATGCCTCGC CCATGATGAT GCGCCTCGTG
AGCTCAGATG CCATTCTCAA GCAAGAAGCC TTGGTTAAGC CAGTGGCCGC TCCGACGTCT
GTGAATCCCG CGAGCGGTTC ATGCTGCGCC AGTAAGGCGG CCCCTGAGCC GGTCAGCTCA
TGTTGTAGCA GTAAGCAAGA GGTGAAGTCG GCGAGCTCAT GCTGTTCGAG TGCTAAGGGC
GATAGTCAGA ATGCTCAGGG CGAGAGTTGC TGCGAGTCCA TCAAAGATGT CGCTAGCGAG
CTTAAGGGCA CCTCTGTGTT GGCGCGCATG GGTAAGGGCC TGCACTATGC GGCGACTGAT
CTGGTGCGTG ACACTACCGT CTGGCTGTTG ATCGGCCTCT TCTTTGCGGC CCTGGTACAG
ACCTATGTGC CGGGAGATTT CATGGCCAAG TGGGGTGATG GCATCTTGGC CATGTTGGTG
ATGGTGCTGA TCTCTGTGCC CATGTATATC TGCGCTACGG CATCGACGCC GATTGCCGCA
GGTCTGCTGC TGGCGGGGGT ATCGCCAGGT GCCGTGCTGG TCTTCATGCT GGCGGGTCCG
GCAACTAATA TCGCTACCCT GGGGGTGGTA ACCAAGGAGC TGGGTAAACG CGCCCTCTAT
GGCTACCTGG GTGGCGTCTT GGGTGTGGCC TTGGTAGCGG GCGTCTTGGT GAACTATCTG
GTGGCGACCT TTGGTTTCGA GGTGATGCCT CAGGTGGGCG AGCAGCATAA TCTGTTGCCT
TCCCTGGTGG TAAATGCCTC GGGGATCATA CTGGCGATTT TGATGCTCAA AGTCTTGCTG
GCCAAGCTGC CGAAGAACTG GTGGCGCCGG GATTGCTGCT CTTAA
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| Protein sequence | MLLSNFIDLF LDSAPWLLLG LVLAGMLKMF VPMTWMQKQL GGHGVKTTIK AAVLGAPLPL
CSCGVIPAAV GLRRSGASKA ATTSFLVSTP ETGIDSVSVS YVLLGPFMAV VRPIAAVTSA
IVAGLLVGRD DDEAKAAEVA HSAGSKRDEA DKAEASSSCC SSKPAQKSLE KAESSSCCGD
KPSAPVRMTT DASPMMMRLV SSDAILKQEA LVKPVAAPTS VNPASGSCCA SKAAPEPVSS
CCSSKQEVKS ASSCCSSAKG DSQNAQGESC CESIKDVASE LKGTSVLARM GKGLHYAATD
LVRDTTVWLL IGLFFAALVQ TYVPGDFMAK WGDGILAMLV MVLISVPMYI CATASTPIAA
GLLLAGVSPG AVLVFMLAGP ATNIATLGVV TKELGKRALY GYLGGVLGVA LVAGVLVNYL
VATFGFEVMP QVGEQHNLLP SLVVNASGII LAILMLKVLL AKLPKNWWRR DCCS
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