| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3399 |
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| Symbol | |
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| ID | 4923702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4046792 |
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| End bp | 4048933 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165011 |
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| Product | FMN-binding domain-containing protein |
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| Protein accession | YP_001095524 |
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| Protein GI | 127514327 |
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| COG category | [K] Transcription |
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| COG ID | [COG3901] Regulator of nitric oxide reductase transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.360952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAGAT TGATGCACCA TGCGAGGCAA GCAAAATGGA TTTTATTGAC CCTGTTGGCA
CTCATGCTGG CACTTATGTT AGCCATGCCC AGCTATGCCC TGTTTGTCAG CCCGCCCAAA
GATCCCCAGC CCATTCTGCA TGAGCTGTTC CCCGAGGCGA CACGCATCTC AGACAAACAG
GGCGAGCCCG CCCTGTGGAC CATCTACAAA GATCAGCAGA TCCTGGGCTA TGGCTTCGAG
ACAAATGATA TCGCCCGCAT CCCCGCCTAC TCGGGCGAGC CGGTCAACAT CCTGGTAGCC
ATCGACCCAG AGGGTAAATA CCTGGGCGCC AAGGTGCTGG AGCACCACGA ACCCATCATC
CTGGCGGGGA TCCCAGAGAG CAAGCTGTGG AAATTTGCCG AGCAATACAC CGGGCTGTCG
GTCAAAGACA GGCTCAAGGT GGGCGGCAAC GAGAAGGAGG GCATAGTCGC CATCGACGGC
CTCTCGGGCG CGACCGTGAC CGTCATGGTG ATGAACGTCG CCATCACCAA GGCCGCTACC
CAGGCCGCCA TCGCGCTCGG GATCATCGAG CAGCAGGCCG ACCAGATCCA GCCAATCTCC
ACCATCAAGC AGGAACTCTT CACCCCAGCT AACTGGACCG AGCTGACCGG CGATGGCTCG
ATTCGCAAAC TCTACCTGAC CCGCGGCGCC GTTGACGACG CCTTCGAGGG CACCGCCGCC
GAGGAGGTCG ACAAGGCCAG CGACGATGAG AAGCAGGAGA TGTTTGCCGA GATCTATTAC
ACCTTGGCGG ACATCCCTAC TATAGGCAAG AACCTCTTCG GCGAGGCCGA CTATCAGTGG
CTGATGCAGA CGCTGCAACC CGGCGAGCAC CTGGTGGCCG TCATGGGCAA TGGCTACTCC
TTCAAGGGCT CTGGCTATGT GCGTGGCGGC ATCTTCGATC GCATACAGGT GCATCAGAAA
GATAACGCCA TCTCCTTCAG GGATCTGGAC CACAACCGCA TCAGCGACCT CTACATCCAG
GGCGCCCCCA AGTTCAACGA GATGTCAGTG TTTCGCATCG CCCAGCACCA CGAGTTCGAC
CCAGGTAGCA GCTGGCAGTT TGAACTACTG GTGCGCCGCC AGACCGGCCC TATCGATAGC
ATATTCACCA GCTTCAAGGG GCAGTACGAC CCGCTGGGCA AGTATGTCGA CACTCCGGCG
GCCATAGTGC CCGAGCCGGA GCTCACCATG GTGCAGCAGA TCTGGCACGA CAGACAGCTG
GAGGTGGTGC TACTGCTGAT CCTCATGGGG GTCTTGCTGC TGATCCTCTT CTTCCAGGAC
ATACTGGTGC GCCACCCTAC CTTCATGCAC CGCCTGCGTC ACGGCTTCCT GGTGGTTACC
GTGGTGGTGA TCGGCTGGAG CTGGGGCGGA CAGCTCTCTG TGGTTAACGT GTTTACCTTC
CTGCACGCCC TGATGAAGGA TTTCTCTTGG GATCTCTTCC TGCTCGATCC CATCATCTTC
ATTCTCTGGT GCGCCGCTGC TGTGACCATG CTGCTGTGGG GACGCGCCGT CTACTGCGGC
TGGCTCTGCC CCTTCGGTGC CCTGCAGGAG TTGGTCAATG TCATGGGCCG CTACTTCAAG
CTACCGCAGG TCGAGCTGCC CTTCGCCGTA CATGAGCGCC TATGGGCCAT CAAGTACCTC
ATCCTGTTGG CGCTGTTTGG CCTGTCGCTG GACTCGCTAG CCATGGCTGA GCAATTTGCC
GAGATAGAGC CCTTCAAGAC CACCTTCTTG CTCAAGTTCG ATCGCGAGTG GCCCTTCATT
CTCTGGGCGC TGCTGATGAT CTTCTCCAGC CTGTTTAATC GCAAGACCTT CTGCCGCTAT
CTCTGCCCGC TGGGTGCGGC CTTGTCGGTG AGCAACAGCG TGCGTCTGTT CGACTGGCTC
AAGCGCCGCC CCGAGTGCGG TACGCCCTGT AAGACCTGTG CCAAGGAGTG CGAGATCCAG
GCGATTCATC CCAACGGGGT GATCAACATG CGCGAGTGCC ACTACTGCCT CGACTGTCAG
GTGACCTATT TCAACGAAGA GAAGTGCCCA CCGCTGAAAA AACTGGCGCG CAAACGCCAG
CAATACAAAG ACCAAGAGAT CCCAACGGTC ACCGCCGTAT AG
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| Protein sequence | MARLMHHARQ AKWILLTLLA LMLALMLAMP SYALFVSPPK DPQPILHELF PEATRISDKQ
GEPALWTIYK DQQILGYGFE TNDIARIPAY SGEPVNILVA IDPEGKYLGA KVLEHHEPII
LAGIPESKLW KFAEQYTGLS VKDRLKVGGN EKEGIVAIDG LSGATVTVMV MNVAITKAAT
QAAIALGIIE QQADQIQPIS TIKQELFTPA NWTELTGDGS IRKLYLTRGA VDDAFEGTAA
EEVDKASDDE KQEMFAEIYY TLADIPTIGK NLFGEADYQW LMQTLQPGEH LVAVMGNGYS
FKGSGYVRGG IFDRIQVHQK DNAISFRDLD HNRISDLYIQ GAPKFNEMSV FRIAQHHEFD
PGSSWQFELL VRRQTGPIDS IFTSFKGQYD PLGKYVDTPA AIVPEPELTM VQQIWHDRQL
EVVLLLILMG VLLLILFFQD ILVRHPTFMH RLRHGFLVVT VVVIGWSWGG QLSVVNVFTF
LHALMKDFSW DLFLLDPIIF ILWCAAAVTM LLWGRAVYCG WLCPFGALQE LVNVMGRYFK
LPQVELPFAV HERLWAIKYL ILLALFGLSL DSLAMAEQFA EIEPFKTTFL LKFDREWPFI
LWALLMIFSS LFNRKTFCRY LCPLGAALSV SNSVRLFDWL KRRPECGTPC KTCAKECEIQ
AIHPNGVINM RECHYCLDCQ VTYFNEEKCP PLKKLARKRQ QYKDQEIPTV TAV
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