| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3389 |
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| Symbol | |
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| ID | 4923929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4038577 |
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| End bp | 4039332 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165001 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095514 |
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| Protein GI | 127514317 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00215189 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA GGAAATGGCT TCTCCTCGCG CTAGTCGCCG CCCAGCCCGC GCTGGCCGAT
GATATGATCC AATGGTGGGA CTTCAGTGCC ACCGCCCTTT ACGGCGACAA CTATGATCTG
GCGCCCTCGG AGCGACAAAC CACTATTACC CTAGAAACTG CCGGCGGCTG GAAGTATGGC
GACTGGTTCG CCTTTCAGGA CTTCATCTAC TTCAATGGTA ACAACGGCGG CAAAGACAGC
ACCACCTATG GTGAGATCTC GCCCCGCTTC AGCGCCAGCA AGATCTTAGG CAAGCCTGTG
GGCGTAGGCG CCATCACAGA CGTGTCGTTG GCACTCACCT ACGAAGAGGG CGAAGGCCCG
GTGAAGAGCT TCCTCTATGG TGTGGGTCTC GACTTCAAGA TCCCTTATTT CAGCTACTTC
CAGCTAAACA CCTATCGCCG CGACGCTATC AGCACCGGCA ATCTGAGTGA CGGCTGGCAG
TTGACCCCAG TCTTTCGTAT GGATTTCCCG GTAGGCCACT CGAACATCGT CTTCGACGGC
TTTATCGATT GGGTATTCTC GGCCGACAAC ACTGGCTATG AAGAGAACTT CCACTTCAAC
CCTCAGGTTA AGTACGACCT GGGCGCAGCC ATCTTCGGTG CTCACAAGAA AGATAAGCTG
TTCGTCGGTA TCGAATACGA TTACTGGAAG AACAAGTATG GTGTTAAGGG CATAGATCAG
AACACCTACT CTGTGATCGC CAAGTATCAC TTCTAA
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| Protein sequence | MMNRKWLLLA LVAAQPALAD DMIQWWDFSA TALYGDNYDL APSERQTTIT LETAGGWKYG
DWFAFQDFIY FNGNNGGKDS TTYGEISPRF SASKILGKPV GVGAITDVSL ALTYEEGEGP
VKSFLYGVGL DFKIPYFSYF QLNTYRRDAI STGNLSDGWQ LTPVFRMDFP VGHSNIVFDG
FIDWVFSADN TGYEENFHFN PQVKYDLGAA IFGAHKKDKL FVGIEYDYWK NKYGVKGIDQ
NTYSVIAKYH F
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