| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3388 |
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| Symbol | |
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| ID | 4923928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4037817 |
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| End bp | 4038278 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640165000 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095513 |
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| Protein GI | 127514316 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000297052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTT CTAATCCTAT CTTTATCTGG ATTGCCGTCG GTTTAGTCTT GATGTTAGCC
GAGATCATTC TGCCTGGCGG TATCGTTATT TTCCTGGGTG CCGCCTGTGT GGTGGTGGCG
GGCGCATTGA CCCTAGGTTG GGTCGAAGGC TTTGTGCAGG CCCTGACGCT CTGGTTCATC
GCCGCTATCG TCTTGTTACT GGCTTTTCGT CAGCTGACAC AGCGCTTGGT GGGTGGTGAT
TCCCATGTGG ATAATACCGA TGAGGAGTTT GACCTTTATA ACCAAGTTGC CGTCGTCAAG
GCGGTGATCG GCCCAGCACA GCAGCAGGGG CGCGTCGAGT TTCAGGGAAG CGAATGGCCA
GCACTGGGTG ATGGCAGCGA GATCCCTATC GGCGCGCGCG TCAGAGTGAT CTGTCGCGAG
AATATTGCCC TGGTCGTTGA ACCTTTGACA GAGCAGGCAT AG
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| Protein sequence | MEFSNPIFIW IAVGLVLMLA EIILPGGIVI FLGAACVVVA GALTLGWVEG FVQALTLWFI
AAIVLLLAFR QLTQRLVGGD SHVDNTDEEF DLYNQVAVVK AVIGPAQQQG RVEFQGSEWP
ALGDGSEIPI GARVRVICRE NIALVVEPLT EQA
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