| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3386 |
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| Symbol | |
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| ID | 4923926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4035929 |
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| End bp | 4036864 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164998 |
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| Product | band 7 protein |
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| Protein accession | YP_001095511 |
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| Protein GI | 127514314 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0131502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCAG ATATCAACAC AGATTTAATC GTACTGGGCA TTTGGGGACT GATCTTCGCC
ATCTTCATCA TCAAGCTGTT TCAGTCGATC CGCCTGGTGC CTACCAAGTC AGCCTATATT
GTCGAGCGTC TGGGTAAGTA TCACACCACC TTAGATGCCG GTTTCCATGC CCTGGTGCCT
TTCATCGACA AGGTGGCCTA TGTGCATGAC CTGAAAGAGG AAACTATCGA TGTGCCGCCT
CAGGAGTGTT TCTCCAGCGA CGAGGTAAAT GTCGAGGTGG ATGGGGTTAT CTATATCTCC
GTGATGGATC CCGTGAAAGC CAGCTATGGG GTGACCGACT ACCGTTACGC GGCCATTCAA
CTGGCGCAGA CCACCACTCG CTCTGTGATT GGTACCCTGG ATCTCGACCG CACCTTCGAG
GAGCGTGACG TGATCAGCGC CAAGGTGGTA GAGGTGCTGG ATCAGGCTGG CGCTACCTGG
GGGATCCGGG TGCACAGATA TGAGATCAAG AATATCGCCC CACCCGAGAC GGTGAAGAAC
GCCATGGAGA TGCAGGTGAA CGCCGAGCGT GAACGCCGCG CCCTGCTGGC CAAAAGTGAG
GGTGATAAGC AGAGCAAGAT CAACCGCTCC GAAGGGGTCA AGGCGGAGAT GATCAACCGC
TCCGAGGGTG AGATGCAGAA GCGGATCAAC GAGGCCGAGG GTAAGGCCGA GGAGATCCTC
ACCATCGCCA AGGCGACCGC CGAGTCTATC GAGCGCATGG CTCAGGTGGT GTCGGCGCCC
GGCGGTAAGA ACGTGGTACG CATGCAACTT GGTGCCCAGT ACCTCAAGCA GTTCGACGGC
CTGACCAACA GCGCCAATAA GATAGTATTG CCGGGTAACA TGATGGACTT CGATCACTGG
ATGGACAGCA TAGGGCTGGA GGAGAGCAAG GACTAA
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| Protein sequence | MIADINTDLI VLGIWGLIFA IFIIKLFQSI RLVPTKSAYI VERLGKYHTT LDAGFHALVP
FIDKVAYVHD LKEETIDVPP QECFSSDEVN VEVDGVIYIS VMDPVKASYG VTDYRYAAIQ
LAQTTTRSVI GTLDLDRTFE ERDVISAKVV EVLDQAGATW GIRVHRYEIK NIAPPETVKN
AMEMQVNAER ERRALLAKSE GDKQSKINRS EGVKAEMINR SEGEMQKRIN EAEGKAEEIL
TIAKATAESI ERMAQVVSAP GGKNVVRMQL GAQYLKQFDG LTNSANKIVL PGNMMDFDHW
MDSIGLEESK D
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