| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3384 |
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| Symbol | ubiA |
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| ID | 4923924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4032598 |
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| End bp | 4033458 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164996 |
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| Product | 4-hydroxybenzoate octaprenyltransferase |
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| Protein accession | YP_001095509 |
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| Protein GI | 127514312 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTAA GGGATAAATT GGACGCCTAT TTGCGTCTGG CGCGGATGGA TAGACCCATA
GGTACCTTCC TGCTGCTGTG GCCATGTTTG ATGGCATTGG TGTTGGCTGC CGGCGGCATG
CCGGATCTTA AGGTGTTGAT CATCTTCGTT ATCGGTGTGG TGGTGATGCG CGCCTGTGGC
TGTATCATCA ACGACTATGC CGATCGTAAG TTGGACTCAC ATGTGGAGCG CACCAAGAGC
CGGCCCCTGG CCAGCGGCGA GGTGACGGTC AAAGAGGCGC TTATCCTGTT CGTGGTGATG
GGCCTGCTGG CCTTTGGCTT GGTGCTGATG CTCAACCCGC TGGTGGTGCA ACTCTCCTTC
GTCGGTATCA TACTGACCAT CATCTACCCC TTTACCAAAC GTTTCACCAA CATGCCGCAG
ATGTTCCTCG GCGTGGTGTG GAGCTGGTCG ATCCCCATGG CCTATGCGGC GCAGCTAGGC
ACAGTGCCGG TAGAAGCCTG GTGGCTGTTT GCCGCCAACT GGTGCTGGAC AGTGGCCTAC
GACACCATGT ATGCCATGGT GGACAGAGAC GATGATCTCA AGGTGGGCAT CAAGTCGACG
GCGATCCTCT TTGGCCGCTT CGACCGGCAG ATCATCGGCC TGTTTCAGCT GGCCGCCCTG
GGCTGTTTCA TCATGGCGGG GCTCAGCGCC GATCGCGGCC TGGTCTTCGC CTTGGGGATC
CTCACCTTCA TCGGCTTCGG TCTCTACCAG CAGAAGTTGA TCTTCGATCG CGAACGCGCC
CCCTGCCTGC AAGCCTTCTT AAATAACAAC TGGGCCGGTA TGGTGCTCTT CGTGACCCTG
GGCGCCGATT ATCTCATCTA A
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| Protein sequence | MSLRDKLDAY LRLARMDRPI GTFLLLWPCL MALVLAAGGM PDLKVLIIFV IGVVVMRACG
CIINDYADRK LDSHVERTKS RPLASGEVTV KEALILFVVM GLLAFGLVLM LNPLVVQLSF
VGIILTIIYP FTKRFTNMPQ MFLGVVWSWS IPMAYAAQLG TVPVEAWWLF AANWCWTVAY
DTMYAMVDRD DDLKVGIKST AILFGRFDRQ IIGLFQLAAL GCFIMAGLSA DRGLVFALGI
LTFIGFGLYQ QKLIFDRERA PCLQAFLNNN WAGMVLFVTL GADYLI
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