| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3382 |
|---|
| Symbol | |
|---|
| ID | 4923922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4030716 |
|---|
| End bp | 4031732 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640164994 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_001095507 |
|---|
| Protein GI | 127514310 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACATCA TTACCAGTGC TTTTCCTCAG CGCAGAATGC GCCGCATGCG TAAACACGAT
TTTAGTCGCC GTCTGATGGC CGAAAACCAG CTGTCGGTAA ACGACTTGAT CTACCCTATG
TTCGTGCTCG AAGGTAATAA CCGTACTGAG CAGGTCGCTT CAATGCCTGG CATCGAGCGC
TACTCAATAG ATCTATTGCT CAAGGAAGCG GAAGAACTCG TTAAGCTGGG GATCCCTCTG
GTGGCCCTGT TCCCTGTGAC CCCAGCCGAG AAGAAGACCC TGATGGCCGA AGAGGCCTAC
AACGCCGACG CACTGGCGCA GCGCGCGGTT CGCGCCCTGA AAGAAGCCTT CCCACAACTT
GGGGTGATGA CAGACGTGGC GCTGGATCCC TTCACCACCC ATGGTCAAGA CGGCATCATT
GACGAAGACG GCTATATCCT GAACGACATC ACCACAGAGA TCTTGGTGAA GCAGGCCCTG
TCTCACGCCG AGGCCGGTGC CGATATCGTG GCGCCATCGG ACATGATGGA TGGCCGTATC
GGCGCGATTC GTCAGGCGCT GGAAGCAGCG GGTCACGTAA ACACCCAGAT CATGGCGTAT
TCGGCCAAGT ACTCCTCTAA CTACTATGGT CCCTTCCGTG ATGCGGTCGG CTCTGCCGGC
AACCTCAAGG GCGGCAACAA GCACAGCTAC CAGATGGATC CGGCCAACAG CGACGAAGCC
CTGCACGAGG TCGCCCTAGA TATTCAGGAA GGCGCCGACA TGGTGATGGT TAAGCCTGGC
ATGCCATACC TGGATATCGT TAACCGCGTC AAGACAGAGC TGGCCGTACC GACCTTCGCC
TATCAGGTGA GCGGTGAGTA TGCCATGCAC ATGGCGGCCA TCGAGAATGG CTGGCTGGCC
GAGAAGGCGA TCGTGATGGA ATCACTGCTC TGCTTCAAGC GCGCCGGTGC CGATGGCATC
CTAACTTACT TCGCCAAGCG TGCCGCACAG TGGCTGAAGG AAGCCGATAA CAAGTAA
|
|---|
| Protein sequence | MNIITSAFPQ RRMRRMRKHD FSRRLMAENQ LSVNDLIYPM FVLEGNNRTE QVASMPGIER
YSIDLLLKEA EELVKLGIPL VALFPVTPAE KKTLMAEEAY NADALAQRAV RALKEAFPQL
GVMTDVALDP FTTHGQDGII DEDGYILNDI TTEILVKQAL SHAEAGADIV APSDMMDGRI
GAIRQALEAA GHVNTQIMAY SAKYSSNYYG PFRDAVGSAG NLKGGNKHSY QMDPANSDEA
LHEVALDIQE GADMVMVKPG MPYLDIVNRV KTELAVPTFA YQVSGEYAMH MAAIENGWLA
EKAIVMESLL CFKRAGADGI LTYFAKRAAQ WLKEADNK
|
|---|
| |