| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3377 |
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| Symbol | |
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| ID | 4923917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4026152 |
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| End bp | 4026550 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164989 |
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| Product | twin-arginine translocation protein, TatB subunit |
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| Protein accession | YP_001095502 |
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| Protein GI | 127514305 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1826] Sec-independent protein secretion pathway components |
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| TIGRFAM ID | [TIGR01410] twin arginine-targeting protein translocase TatB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.434126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACG GTATCGGCTT TATGGAGCTG CTGTTGATTG GTGTTTTGGG GCTGGTCGTA
CTCGGCCCCG AAAGACTACC GGTCGCGGTG CGCTCAATTA CAGGCTGGAT TCGTGCCATG
AAGCGCATGG CTAACTCGGT AAAAGATGAG CTGGAGCAAG AGCTTAAAAT TGAGCAGCTG
CACGCGGATC TTAAGAAGGC GGAAAGCCAG GGGTTAAAGA ACCTCTCTCC CGAGTTACAG
GATTCAATCG ATCAATTAAA AGAAGCAGCC CAATCTGTTA ATCGTCCCTA TAAGGTAGAA
GATATTGCCA CTGGCAGCGA ACCCGCCAGC AGCGAGGCGA AACCTGCAGA GACCACGACA
GCCAAGGCCA GCAATTCAAC CGAAAAATCT GACGGGTAG
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| Protein sequence | MFDGIGFMEL LLIGVLGLVV LGPERLPVAV RSITGWIRAM KRMANSVKDE LEQELKIEQL
HADLKKAESQ GLKNLSPELQ DSIDQLKEAA QSVNRPYKVE DIATGSEPAS SEAKPAETTT
AKASNSTEKS DG
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