Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3376 |
Symbol | |
ID | 4924219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4025915 |
End bp | 4026145 |
Gene Length | 231 bp |
Protein Length | 76 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640164988 |
Product | twin arginine-targeting protein translocase |
Protein accession | YP_001095501 |
Protein GI | 127514304 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1826] Sec-independent protein secretion pathway components |
TIGRFAM ID | [TIGR01411] twin arginine-targeting protein translocase, TatA/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0852423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGCA TCAGTATTTG GCAACTTCTT ATCATTGCTT TAATCGTTGT TTTGCTTTTC GGAACTAAGA AATTGCGCTC TCTAGGTGGT GACCTCGGCG GTGCTGTTAA AGGCTTCAAG AATGCTATGT CTTCTGAAGA TGAGAAGAAG GCTATCGAAG ACACCAGCGC AGAAAAAACA GCTCAGACTG AAGAGAAAAA GACTGAGTCC AAGGATAAAG AACAGGCGTA A
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Protein sequence | MGGISIWQLL IIALIVVLLF GTKKLRSLGG DLGGAVKGFK NAMSSEDEKK AIEDTSAEKT AQTEEKKTES KDKEQA
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