| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3374 |
|---|
| Symbol | |
|---|
| ID | 4924217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4023585 |
|---|
| End bp | 4024208 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640164986 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095499 |
|---|
| Protein GI | 127514302 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.581541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG AAATTGCATT GCTGATCTGT GCGGCCCTCG AAACCGCACT CAAAAAAGTG
ACTCAGCAGT CTCCCGGCGC CTACGCCAAA CTCCACAACC TGCAGGGGCG AGTACTCTGC
CTCGAACTCA GCCAACTGGG CTGGCCCATC TACCTGTTGT TTGCCAAAGA GATTCAGGTC
TTTAGTCAGT ATGATGGCGA GGTGACCACC AAGGTGTATG CCGATCTGAC CACCCTCTAT
AAGCTCACCG AGGGCGCCAA CCTTACCGAG CTGCTCAAGC AAGACAAGCT GACCCTGGAA
GGGGATCTCA ACCTGCTACA GAGCTTTAGC CACTTCATGC AGCAGGTGGA GTTCGACTTT
GCCGAGCCAT TGTCACGCTA CATAGGCGAT GCGCCGACTC ACCTGCTCAC CGAGGGCGCC
AAGCAGCTGA AACAACAGCT GAGTCAGGTA CTGAGCAAGA GCTGGGATCA TATGGGCCAG
CTGGCCACAG AGGAATATCG CCTGAGCCCA CACAAGATAG AACTTGTTCA TTTTAGTGAT
AGAATCGAGC AACTTGAGGC CGATACCAAC GCCTTAAGCC AACGGATTGA GCGACTCATA
AACAAGGCAA ACAGCAACAG ATGA
|
|---|
| Protein sequence | MKREIALLIC AALETALKKV TQQSPGAYAK LHNLQGRVLC LELSQLGWPI YLLFAKEIQV
FSQYDGEVTT KVYADLTTLY KLTEGANLTE LLKQDKLTLE GDLNLLQSFS HFMQQVEFDF
AEPLSRYIGD APTHLLTEGA KQLKQQLSQV LSKSWDHMGQ LATEEYRLSP HKIELVHFSD
RIEQLEADTN ALSQRIERLI NKANSNR
|
|---|
| |