| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3366 |
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| Symbol | |
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| ID | 4924209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4013329 |
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| End bp | 4016526 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164978 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001095491 |
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| Protein GI | 127514294 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAG GACACCGCAT GCTGGGCCTC ACCTTAGCCA AACCCAAGCG GCTTACCATA
CGCGTTACCG TGGTGGGCAC CTTTATCATC GCCACCCTGT TCACCGCCGT GGTAGCCATC
GGCCTGCAGT ATTATTTCAG CCAGCGTCTG GCTACCGAGG CCAGCCTCAA GCTCTACAAT
CAGAGCGCCG ACAGCACAGG CAGTTACCTG AATCAGCTCG ACAGTCAGGC GATCAATACC
ACTAAGCTGG TGGCAAACTT CGAGGGCCTT TACACCCCCA TGGGGCTGAG CAAGGAGGCC
AAGCGGGTGT TTAGCCAGGC GATGCGCTCG GCTAGGTTTA TCTACGCCAT CTATCTCGGC
AGCCCTGATG GGGATCTGTT CGAGCTGGTG AATCTCGACG CCCATCCCAT AGTGCGGCGG
CAGCTCAAGG CCTCCCTGGA AGATCGCTGG GTGATCATCA GCATTCAGGG CAAGGGGCAG
GGGCGTATCC GCGCCTTTCA TTACTTAGAC GCCGACTTTA ATCAGCGTGC CAGCCGAATG
GAGCCCACGG ATTACGACGC TAGCATCCGC CCCTGGTTTA TCGACGCCCG CCCGGACAAG
GTGTTTAAGA CAGAGCCCTA CTTGTTTCAG AACCTGCAGG CGCCGGGGAT CACCTATTCG
ATTCGCCTGC CGGGTAGCGA CGCCGTGCTG GCGGTGGATG TGGCCCTGTC GAGCCTGGAT
GACTATCTGG CGCAGCTAGG TAGGGGAGAT GCTCAAGATG GGCGCGAGGT CTATGTCTAC
CGCGCCAGCG GCGCCCTGGT AGCCTCCAAT CGTCTGCAGG CGACTCAGGG GGATATTCCC
ATGGCTAAGC CGCTGGCCCT GACCCCAGAG GAGCAGGCGC TGGTGGCCAA TACCCCGGCG
CTTATCGCCT CTAACGAGAC CGACTGGCCG CCGATCGACT TTGCCGTGGC CGGTCGCCCC
ATGGGCTACA GCGTAGACGT GCTTAATCTG GTGGCCGAGA TGACAGGGCT GACCATCAAC
TACAACAATG GCTTCACCTG GCCGGAATTT GTCGACAAGT TCAAGGCGCG GGAGATCAAC
CTGCTGCACT CAGTGCTCAA TAGCGAGGCC AATCAATCGC TTGGGGTATT TAGTCAGCCC
TTTCTGAGCA TGCCCTTTGC CGCCGTGACA GGGCCGGGCC AGGCGCCGAT AAAGCATGTG
GCCGAGCTGG CGGGCAGGCG GGTGGCCATC CCCAAAGGCT GGTCGATCAT CCCCATCATC
AGACAGTATT TTCCCGAGAT CGAGGTGGTC GAGGTGTCAT CGACCCGAGG CATACTGCAG
GCGGTGAAAG AGGGGCGGGT GTTTGCGGCC ATAGATAACA GCATAGTGCT GCACTACACG
GCGCAGCAGT ACTTTATCGA CGATCTACAG TTTCACGAGG ATCTGGATTA TGCCCCCATC
GACATTCACG CCGGGCTGAG CATAGTGATG CATCCGGAAA ACGCCGGCGT CATCGCACTG
ATCGACAGGG CGATCGCCCA GATCAGTCCA GAGCAGGTGC GGGCGCTACG GAGCAAATGG
TTTGCCGAGG GGCAGCAGGT GGCCCCGGCT AATGTGCAGG GCACTGTGCC CTACAAGGCG
CTGATCGATA TCGCTGCAGA CCCCGGGCGG CAGAAGCAGC TTATCGCCAT CTCGCTCAAT
GGCGAGCCCA GTTTTGTCTA TGTCTCGCCG CTCGGCAGTC ACGCCGCCGA GCAGGAGTTT
TTTGCCATTC TGGTGCCCCA GGAGATGCTG CTGGCGTCCA GCCTGGATAA GGTGAAGAAG
TCAATTGCCA TCACAGGCCT CTGTCTGCTG TTGGCGCTGC CATTTTCCTG GGTGTTTGCC
TCCCCCATCA TCTCGCCGAT AAAACTGCTA GCGCTGGAAA ACCTCAAGGT GAAGTTTCGC
CGCTATGATG AGGTGACCAA GGTGGATTCC TATATCAAGG AGATCGATGA GCTGGCGATC
TCCTTGGTGG ATATGTCAGA GTCGATTCGC CAGCACGAGC AGGACCACAA GGCACTGATG
GACGCCTTCA TCAAGTTGAT CGTTCAGGCG ATCGATGACA AATCGCCCTA CACCGCAGGT
CACTGTAACC GGGTGCCCGA GCTGGGGCTC ATGCTGGCTG AGTATGCGGC CAAGTCGGAT
CTGCCCGCCT TCAAGGAATT TCGCTTCAAG AACGCCGATG AGCACAGGGA GTTTCGCATC
GCCGCTTGGC TCCACGACTG CGGCAAGATC ACCACGCCTG AGCATATCGT CGATAAGGGC
AGCAAGCTGG AGCTGATCTA CAACCGCATC CACGAGGTGC GCATGCGCTT CGAGGTGCTG
TGGCGCGACG CCGAGATCCA CTGTCTCGAG CAGTGCCGGG CAGATCCAGA ACATGAGTCA
GAGCATAGAG CTGAGCTGAA TCGGCGCCGC GAGCAGCTAA CGGAGGATTT CGCCTTCATC
GCCGGGGCCA ACGTGGGCGG CGAGTTTATG GAGCAGGCCG ATATCGACAG GTTGAAGGCC
CTGGCTAAAA TCACCTGGCA GCGTCACTTC GACGATCGTC TCGGGCTGTC GCCGGTGGAG
GAGCTGAATT ACCCTGAATT TTCCGCCGAG GTCAGTCTGC CGGTGACCGA GCAGCTGCTG
GCCGATAAGC CCCAGCATGT GATCGCCCGT CACCGCCCCG AGCTGTTCGA TCCTAAGTTT
GGCATCAAGA TGACGGTGCC CGAGGCGCTC TACAATCAGG GCGAGATCTA TAACCTCAGC
ATCTCTCGCG GCACCCTGAC CGACGAAGAC AGATTCAAGA TCAATCAGCA CATTACCAGC
ACCATCAAGA TGCTGGAGAA CCTGCCCTTC CCGCCAGAGC TGGCCCGTGT GCCCCGTTAT
GCCTCCACCC ATCATGAGAC GCTGAAGGGA ACTGGCTACC CGAGAAAGCT TACAGGCGAT
GAGCTGTCGA TCCCCGAGCG CATCCTGGTG CTGGCGGATA TCTTCGAGGC ACTCACCGCC
GCCGACAGGC CCTACAAGAA GGCCAAGCCA CTGAGCGTCG CCATCGATAT CCTGCATAAG
ATGGTGCTGG ACCAGCATGT GGATGGCGAG GTGTTTAAGC TGTTCCTCTC TAGCGGCATC
TATCTTGAGT ACGCCGAGCG TTATCTGGCG CCGGAGCAGA TAGACGAGGT GGATATCGAC
AAGTACTTGG TAGCTTAG
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| Protein sequence | MGKGHRMLGL TLAKPKRLTI RVTVVGTFII ATLFTAVVAI GLQYYFSQRL ATEASLKLYN
QSADSTGSYL NQLDSQAINT TKLVANFEGL YTPMGLSKEA KRVFSQAMRS ARFIYAIYLG
SPDGDLFELV NLDAHPIVRR QLKASLEDRW VIISIQGKGQ GRIRAFHYLD ADFNQRASRM
EPTDYDASIR PWFIDARPDK VFKTEPYLFQ NLQAPGITYS IRLPGSDAVL AVDVALSSLD
DYLAQLGRGD AQDGREVYVY RASGALVASN RLQATQGDIP MAKPLALTPE EQALVANTPA
LIASNETDWP PIDFAVAGRP MGYSVDVLNL VAEMTGLTIN YNNGFTWPEF VDKFKAREIN
LLHSVLNSEA NQSLGVFSQP FLSMPFAAVT GPGQAPIKHV AELAGRRVAI PKGWSIIPII
RQYFPEIEVV EVSSTRGILQ AVKEGRVFAA IDNSIVLHYT AQQYFIDDLQ FHEDLDYAPI
DIHAGLSIVM HPENAGVIAL IDRAIAQISP EQVRALRSKW FAEGQQVAPA NVQGTVPYKA
LIDIAADPGR QKQLIAISLN GEPSFVYVSP LGSHAAEQEF FAILVPQEML LASSLDKVKK
SIAITGLCLL LALPFSWVFA SPIISPIKLL ALENLKVKFR RYDEVTKVDS YIKEIDELAI
SLVDMSESIR QHEQDHKALM DAFIKLIVQA IDDKSPYTAG HCNRVPELGL MLAEYAAKSD
LPAFKEFRFK NADEHREFRI AAWLHDCGKI TTPEHIVDKG SKLELIYNRI HEVRMRFEVL
WRDAEIHCLE QCRADPEHES EHRAELNRRR EQLTEDFAFI AGANVGGEFM EQADIDRLKA
LAKITWQRHF DDRLGLSPVE ELNYPEFSAE VSLPVTEQLL ADKPQHVIAR HRPELFDPKF
GIKMTVPEAL YNQGEIYNLS ISRGTLTDED RFKINQHITS TIKMLENLPF PPELARVPRY
ASTHHETLKG TGYPRKLTGD ELSIPERILV LADIFEALTA ADRPYKKAKP LSVAIDILHK
MVLDQHVDGE VFKLFLSSGI YLEYAERYLA PEQIDEVDID KYLVA
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