Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3363 |
Symbol | |
ID | 4924206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4010975 |
End bp | 4011427 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640164975 |
Product | 3-dehydroquinate dehydratase, type II |
Protein accession | YP_001095488 |
Protein GI | 127514291 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.259013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAAG CGGTGAAAAT TCTCCTGGTA AACGGCCCCA ACCTCAACCT GCTGGGTCGA CGCGAGCCCG GCCACTATGG TCATCACACC CTGGCGCAGA TCGTCGAGCA GCTTAAGCTG CTGGCTGGTG AGCAAGGCGC CAGCCTGGAT CATATTCAGT CCAACGCCGA ACATGAGCTG ATCGACGCCA TTCACCAGAG CGACGCCGAC TTCATCATCA TCAATCCAGC GGCCTTTACC CACACCAGTG TGGCCCTGAG AGACGCCCTG CTCGGCGTCG CCATCCCCTT CATCGAGGTG CACCTCTCAA ACGTTCATGC CAGAGAGGCC TTCAGGCATC ACTCCTACTT CTCCGACAAG GCGGTCGGCG TCATCTGCGG CCTGGGAGAA CAAGGCTATC GCTACGCCCT GGACTCGGCC ATCGCCCGCG TCAGAGCCGC TCAGGAGAAG TAG
|
Protein sequence | MSKAVKILLV NGPNLNLLGR REPGHYGHHT LAQIVEQLKL LAGEQGASLD HIQSNAEHEL IDAIHQSDAD FIIINPAAFT HTSVALRDAL LGVAIPFIEV HLSNVHAREA FRHHSYFSDK AVGVICGLGE QGYRYALDSA IARVRAAQEK
|
| |