Gene Shew_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3360 
Symbol 
ID4922201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4009720 
End bp4009902 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content52% 
IMG OID640164972 
Producthypothetical protein 
Protein accessionYP_001095485 
Protein GI127514288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0699075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAT CTTCACTCTC TCTGACGTCC GCTGCACTGG CCCTGGCTCT GATGGCGTCA 
CTTTCTGGTT GTGCTCCCGA GGTAGGTAGC GAAAAGTGGT GTAAGCAGAT GGAAGATAAG
CCTAAGGGTG ACTGGACGGC CAACGAAGCC GCCGACTACA CCAAGCACTG CGTATTCAAG
TAA
 
Protein sequence
MLKSSLSLTS AALALALMAS LSGCAPEVGS EKWCKQMEDK PKGDWTANEA ADYTKHCVFK