| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3353 |
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| Symbol | |
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| ID | 4922194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3997922 |
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| End bp | 3998383 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164965 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095478 |
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| Protein GI | 127514281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2731] Beta-galactosidase, beta subunit |
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| TIGRFAM ID | [TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00970334 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCTTAG ACACCTTAGA AAACCTGGCA CACTACACCC ACCTGGGACC CCGCATTGCC
AAGGCACTGC AACACCTCAA AGAGACAGAT TTCACCCAGC TGCCGGTGGG CAACTACGAG
CTGGAGGGCA AAGATATCTT TGTCATCGTC AACGATTATG AGACCAAACC AAGAGAGGTC
GAGCCCTTCG AGGTGCATCG CAAATATATC GACGTTCAGT ATGTGGTGAG CGGCGAAGAG
GAGTTTGGCT ATCTGCCCCT GGCGGATCAG ACTCCGTCCA AGCCCTACTA CGACAAACAC
GACTACGCCG AATTTGACTA TGAGTCGAAC AAGGCGCGCG CCGCCTTTAT TCCCTTCAAG
GCCGGCATGT TTGCCCTCTT CTTCCCCCAG GACATGCATA TGCCGGGCGT CTCGGCGACG
CCGCAGAAGG TGCGCAAGGT GGTCATCAAG GTGAAAATTT AG
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| Protein sequence | MILDTLENLA HYTHLGPRIA KALQHLKETD FTQLPVGNYE LEGKDIFVIV NDYETKPREV
EPFEVHRKYI DVQYVVSGEE EFGYLPLADQ TPSKPYYDKH DYAEFDYESN KARAAFIPFK
AGMFALFFPQ DMHMPGVSAT PQKVRKVVIK VKI
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