| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3344 |
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| Symbol | |
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| ID | 4923099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3988719 |
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| End bp | 3989642 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164956 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001095469 |
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| Protein GI | 127514272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.10972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA TAATGATAAC TGGCGCCACC GGCCTGCTGG GGCGCGCTTT AGTTGAGCAA
TTTGCAAAAG AGCCGGTGAC GCTTTTGACC TGCGGCTATT CGCGCGCCGG TAAAGATACC
CATAGGCTGG ATCTGACCGA CGAGGGGGCG GTAAAGCAAT TTATCGAGAC CCACAAACCC
GAGGTGATTC TACACTGCGC GGCCGAGCGG CGACCGGATG TGTCTGAGCG TGACCCCGAG
GCGGCAAAGG CCCTCAACCT GGCCGCGACT CGCCAGCTCG CCCAGGCGGC TAAGGCTAAT
GGTGCCTGGC TCTGTTACAT CTCCACAGAT TATGTGTTCG ATGGCACCTC GCCCGATTAT
GGCGAAGAGG ACCAGACCTA TCCGCTCAAT TTCTATGGCG AGACCAAGCG TGAGGGGGAG
CAGGCACTGA TTGAGGTGTC CAGAGAGTTC GCCGTGCTAC GTCTACCCAT CCTCTATGGC
CGGGTCGAGT CGCTGGATGA GTCGGCGGTG TTGGTGATGT TAAAACAGCT AGTCAATCAG
GTGCCTACCC AGCAGGATGA TTGGGCGGTG CGCAGCCCCA CCTCGACACT GGATATCGCC
AACGCCCTGG TTAAGCTGGT TGCACGTCAG CAACAGGCGG GCGATGTGGC GGGCATCTAT
CATTTCACCG GCACCGAGCG CATGACCAAG TACCAGATGC TGCTTAAGAT GGCCGAGATA
ATGGGGCTGA GCAGTAAGCA CATCTCGCCT CAGTCGAGCC CGAGCGACCT GGCCAAGCGA
CCCAAGGATT GCAGCCTGAG TATGGCGCGC CTCAAATCTT TGGCAATAAA GAGTGAAATC
GACTTCGAAC AGGGCGTAAA ATACAGCCTG TCCCGCTCGG GTGACGCCCT GGCGAAGATA
GGATTAGTCT TTGATCTCAA ATAG
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| Protein sequence | MLKIMITGAT GLLGRALVEQ FAKEPVTLLT CGYSRAGKDT HRLDLTDEGA VKQFIETHKP
EVILHCAAER RPDVSERDPE AAKALNLAAT RQLAQAAKAN GAWLCYISTD YVFDGTSPDY
GEEDQTYPLN FYGETKREGE QALIEVSREF AVLRLPILYG RVESLDESAV LVMLKQLVNQ
VPTQQDDWAV RSPTSTLDIA NALVKLVARQ QQAGDVAGIY HFTGTERMTK YQMLLKMAEI
MGLSSKHISP QSSPSDLAKR PKDCSLSMAR LKSLAIKSEI DFEQGVKYSL SRSGDALAKI
GLVFDLK
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