| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3343 |
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| Symbol | |
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| ID | 4923098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3987462 |
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| End bp | 3988709 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640164955 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001095468 |
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| Protein GI | 127514271 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.112978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACTC TGAGTTATGG CCGCTATCGG GCCGCCGACC AACTGGCCTT GCTGCGCATC
ATGGCCTTGA TGCTAAAACT CTGTCTCACC TTCCTGTTTG CCGACACCTT CGGTCTGTCG
CTCCATAGCC CGGCGCTGAA TCTCACCCTG ATCCTCGAGG CCTTCTATTT AAGCTTCACC
TTCTGGCTGA GAAAGCCCCT GCTCAGTAGC GAGTCTGGGC TGTTTATCGC CCTGGTGCTC
GACACCCTGC TATGGATCTC CTGGCTCTAT TTCTCCGGTG GCGCTACCAA CGCCTTCATC
TCCCTGCTAT TGCTGCCGAT AGCCATCGCC GCCGTGCTGC TGCCCTTCTG GGCGCCCTGG
TCATTGGCCC TGCTGTCGAA CCTGGCCTAC AGCCTGATGC TGTTTACCAT GCCGGAGAGC
GCCATGAGTC ATCACGGCAT GGATATGCAG TCTCACTACC TGGGGATGTG GGTCAACTTC
ATCATCTCCT CCCTGGTGTT GACCACGAGT GTGGCCCTGC TGGCCAAACG CATGCGGCGC
CAGGATGCTC AGCTTGCCTT TATGCGTGAG GCGCAGTTGC GTCAAGAGAA GTTGATCGCC
CTGGGTACCG CCTCGGCGCA GATGGCTCAC CGGCTGGCGA CCCCACTGGC TAGCATGAGG
TTGCTGGTGG ATGAGTTGCA GGAGGAGGCC GATGGTAATG GGCCTGCGCT GCAGGAGATG
CAATCGGCAC TGACGGTTTG CGAGTCCACC CTGACGGCGC TGCGCAGCGC CACCGAATCG
ATCCGCGAGG GGGCGCAGCG GCTGGAATCC GCCGAGCAAC TGCTGAGCGG CTTGAGTGAG
CAGGTCAATC TGCTTATGCC GGCGGTGAAA CTGTCGTTGG AGCCAGATGA TGGCCTCGAC
AGGCTGCAGT TGCGGGTCGA TGCCAGCCTG CAGCCCGCCT TACTGGCGCT CATCGAGAAT
GGTGCCAGGG CCAGTCAGGA GGCGACGGGC GAGCAGAAGG TGAGCTTCTC CGCCCAGCGT
CAGGGGGATG AGCTGGTGCT TGGGGTGCGC GACTTCGGCC CGGGTATTCC GGCGTCTTTG
GTGCAGCAGC TGGGGCATCA GATAATCGAG GAGCCCAAGG GGATGGGGGT CGCCCTGTTG
CTCAGCCATG CGAGCCTGGA GCGTCTGGGC GGGCGCTTGA TCCTCGGCAG TCATGTGGAT
GGCGGCGCCG TGGCCCAGGT CTACCTGCCG ATACAGGGGG CTGCATGA
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| Protein sequence | MTTLSYGRYR AADQLALLRI MALMLKLCLT FLFADTFGLS LHSPALNLTL ILEAFYLSFT
FWLRKPLLSS ESGLFIALVL DTLLWISWLY FSGGATNAFI SLLLLPIAIA AVLLPFWAPW
SLALLSNLAY SLMLFTMPES AMSHHGMDMQ SHYLGMWVNF IISSLVLTTS VALLAKRMRR
QDAQLAFMRE AQLRQEKLIA LGTASAQMAH RLATPLASMR LLVDELQEEA DGNGPALQEM
QSALTVCEST LTALRSATES IREGAQRLES AEQLLSGLSE QVNLLMPAVK LSLEPDDGLD
RLQLRVDASL QPALLALIEN GARASQEATG EQKVSFSAQR QGDELVLGVR DFGPGIPASL
VQQLGHQIIE EPKGMGVALL LSHASLERLG GRLILGSHVD GGAVAQVYLP IQGAA
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