| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3339 |
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| Symbol | |
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| ID | 4923094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3982465 |
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| End bp | 3982839 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164951 |
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| Product | glutathione-dependent formaldehyde-activating, GFA |
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| Protein accession | YP_001095464 |
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| Protein GI | 127514267 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3791] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.456035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCTCT CTTGTCATTG TGGGCAGGTA CAACTGACCC TGGCGACGCC TCCAGAAACG
CTCACCTCTT GCAACTGCTC CATCTGCAGC CGCTATGCCG CCCTGTGGGG CTATTTTGAT
CCCAAGGAGG TCAGCCTGAA CGAGCTGGCA CCGTCCGGCC AGGAGGAGAG TGCGTTTGTG
GGGTATAGCC ATGGGGATAA GTATCTGGTC TTCTACCACT GCAAGCGCTG TGGCTGCGTG
ACCCATACCA TGACGACGGA CAAGGTGAGC GAGCCCAGGA TAGCGCTGAA CTTCAGGATG
GCACCAGAGG CGCTGCGCGA GAAGATTCAG ATCCGCCACT TCGATGGCGC CGACACCTGG
CAATATCTGG ATTAA
|
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| Protein sequence | MQLSCHCGQV QLTLATPPET LTSCNCSICS RYAALWGYFD PKEVSLNELA PSGQEESAFV
GYSHGDKYLV FYHCKRCGCV THTMTTDKVS EPRIALNFRM APEALREKIQ IRHFDGADTW
QYLD
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