| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3327 |
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| Symbol | |
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| ID | 4924037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3967766 |
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| End bp | 3969211 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164939 |
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| Product | RNA-metabolising metallo-beta-lactamase |
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| Protein accession | YP_001095452 |
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| Protein GI | 127514255 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA CGCTCTCTTT TCTCGGTGCG GCTCAGGAGG TGACGGGCTC CTGTCATCTT
CTCGATATTT CGGGTCGTCA GGTGCTGCTC GATTGCGGCC TAATCCAGGG GGGTAAGCTC
GATGCCCTGC GCAATCACGA GCCCTTCCTC TTCGAACCTA CAGAAATCCA TGCCGTAGTG
CTGAGCCATG CCCATATCGA TCACTCGGGG CGTCTCCCTC TGCTGGTCAA GTCTGGCTTT
ACCGGCCCCA TCTACACCCA TAAGGCGACG GTTGAGCTGT GTGAGGTGAT GCTCAGGGAT
GCCGCCATGC TGCAGGTACG CGATGTGGAG CGCCTCAACA AGAAGCGGGT GAAGATGGAT
CTGCCGCCGC TGGAGCCCCT GTTCGACGAG GAAGATGTGG CGCTGGTGAT CAAGCAGTTT
GTCGCCCTGG ATTATGGTCA GTCGGTGAAG GTGGTGCCTC AGTTGACGGC TTGTCTAAGC
GATGCCGGGC ATATTCTAGG CTCGGCCGTG GTCGAGTTGT GGCTGGGGGA GGGAAGCGAG
CGCAAGAAGC TGGTGTTTAG CGGCGATCTG GGGCGGGCGG GCATGCCGAT TCTGGATGAT
CCTACGCTGA TCGATGACGC CGATCTGGTG TTGATGGAGA GCACCTATGG TGACAGGCTA
CACCGAAGCT GGGACGACAC CCTGGCGGAG CTTAAGGCTA TCTTCGCCAA GACGATTAAG
GAGAGCCGCG GCAATATTCT TCTGCCGGCA TTCTCCGTCG GGCGGGCTCA GGAGCTGCTC
TATCTGTTTC ACCTCTATGC CAAGGAGTGG GCGCTGTCCA ACTGGCGTAT CTGTCTCGAC
AGCCCCATGG CGATCAAGGC GACCCAGATT TATGTGGCCA ACTATCAGCT GATGGATGAG
GACTTTAAGC GCTTCACCCG TCTGTCGCCG GGCAAGCATC CGCTGCTCTC GAACGTGGAT
TTCATCGACA GCACCCAAGA GTCGATGGAG CTTAACGAGA TCCATCAGGG CTTGATCATC
ATCGCCGGTA GCGGCATGTG CAATGGCGGC CGGATCCGCA GCCATCTGGA GCATAACCTG
GCCAATCCCC AGTCGGATGT GATCATCTGT GGTTTCCAGG CCTTGGGGAC GCCGGGACGC
CTGCTGGTGG ATGGCGCCGA GTCGCTCACC ATACATGGCC GTGATATTCC GGTGAAGGCC
AAGATACATA CGGTCGGTGG GTTGTCGGCT CACGCGGATC AGGCCGAGCT TATCCATTGG
TATCGACACT TTAAACACAC GCCGCCGCTG ATTCTGATCC ATGGTGAGCG CGAGGCGCAG
CAGCGGCTCA AGGCCGAGTT GGTGCCCGAG GGAAGCCAGT CACCCCATGT GGTGATCGCC
GAGCGGGGCG ATACCTTAGA CCTTACCGCC TTGCCGGAGC TGGTTTGGCT GCTAGACCGA
GATTAG
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| Protein sequence | MQMTLSFLGA AQEVTGSCHL LDISGRQVLL DCGLIQGGKL DALRNHEPFL FEPTEIHAVV
LSHAHIDHSG RLPLLVKSGF TGPIYTHKAT VELCEVMLRD AAMLQVRDVE RLNKKRVKMD
LPPLEPLFDE EDVALVIKQF VALDYGQSVK VVPQLTACLS DAGHILGSAV VELWLGEGSE
RKKLVFSGDL GRAGMPILDD PTLIDDADLV LMESTYGDRL HRSWDDTLAE LKAIFAKTIK
ESRGNILLPA FSVGRAQELL YLFHLYAKEW ALSNWRICLD SPMAIKATQI YVANYQLMDE
DFKRFTRLSP GKHPLLSNVD FIDSTQESME LNEIHQGLII IAGSGMCNGG RIRSHLEHNL
ANPQSDVIIC GFQALGTPGR LLVDGAESLT IHGRDIPVKA KIHTVGGLSA HADQAELIHW
YRHFKHTPPL ILIHGEREAQ QRLKAELVPE GSQSPHVVIA ERGDTLDLTA LPELVWLLDR
D
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