| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3322 |
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| Symbol | |
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| ID | 4924032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3962234 |
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| End bp | 3963160 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164934 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001095447 |
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| Protein GI | 127514250 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCC ACACCCAAGT TAGCGCCAAA GGCAATGCCC TGGCGATCGT CTCCTTTCTG
CTGTGGGGGC TACTGCCCCT CTACTATCAG TTTCTGCCGG GCGCGGATAT CACTGAGATG
CTGGCGATTC GCCTGCTCTG CTCTGTGCCT TTCATGCTGC TGGTCTTTCT GCTGCTTGGC
AAACCTCTGC CCAGCCTGGC ACTGCTTAGG ACTAATCTTC CCTCGGTCGC CCTGTGCGCC
CTAGCCTCAC TCATCATGTG CGTCTCCTGG TACAGCTTCA CCTGGGCACT GACCCATGGA
CAGGTGCTAG CGGCGAGCCT GGGCTTCTTC ATCAACCCGC TATTTGCCAT CGGATTAGGG
GTGCTGTTTC TAAAAGACAG GCTGACTGTC GCCCAGAAAT GGGCTGTACT GCTCGGCACT
CTGGGCATAG GCTACATGGT GATGGCCTAT GCCCAGCTCC CCTGGCTGGC ATTGCTGATG
GGCAGCTTCT TCGCCCTCTA TGGTCTGTGC AAAAAGTTTA TCCGTTTCGA CTCGCTCACC
TCTGTCACCA TAGAGGCGGC GCTGCTCACC CCCATCGCCG CTGGCTATCT GTTCTGGCTA
AGCGCCACGG GCCAGAGCGA GGCACTTTCG AGTGGCACGG GTACAATGCT ACTTTACATG
GGCTCGGCGC CCGTAACCCT GCTGCCACTT ATCTTCTTCG CCCTGGCGAT TCGTCACACC
AGCCTCTCCA TGGTCGGCCT GCTGCAGTAC ATAGAACCCA CCATGCACTT CCTGCTGGCG
ATCTTCCTGT TTAACGAGAC GTTCGATAGC GTCAAGGCAG TGAGCTTCGC CCTCATCTGG
GTGGGGCTAC TCCTCTGCTC GCTGGAGGCC CTTCACGGTC TGTGGCGCAG TCTCACCACC
CGGCGACAGC TGCACCACCC CAGCTAG
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| Protein sequence | MPSHTQVSAK GNALAIVSFL LWGLLPLYYQ FLPGADITEM LAIRLLCSVP FMLLVFLLLG
KPLPSLALLR TNLPSVALCA LASLIMCVSW YSFTWALTHG QVLAASLGFF INPLFAIGLG
VLFLKDRLTV AQKWAVLLGT LGIGYMVMAY AQLPWLALLM GSFFALYGLC KKFIRFDSLT
SVTIEAALLT PIAAGYLFWL SATGQSEALS SGTGTMLLYM GSAPVTLLPL IFFALAIRHT
SLSMVGLLQY IEPTMHFLLA IFLFNETFDS VKAVSFALIW VGLLLCSLEA LHGLWRSLTT
RRQLHHPS
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