| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3315 |
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| Symbol | |
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| ID | 4923953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3954682 |
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| End bp | 3954957 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164927 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001095440 |
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| Protein GI | 127514243 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.297486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.989265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAAGT TGGCTCGCGA GCTGACCATC TGCAACAAGT TGGGCCTGCA CGCCAGAGCG
GCGACCAAAC TGGCTGTGCT CGCTGCCAAG TTCGACGCCG AGGTCACCCT GATCCAGGGC
GATAAACAGG CCTCAGCCGC CAGTGTACTC GGCCTCCTGA TGCTCGAAAC CGGCATGGGT
AAAACCATCA CCATCACCAG CGAAGGCAAA GATGCCCAGG CGGCCCTGGA TGCCATCAGC
GCCCTTATTG ACGCCAAATT CGATGAGGCC GTATAA
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| Protein sequence | MTKLARELTI CNKLGLHARA ATKLAVLAAK FDAEVTLIQG DKQASAASVL GLLMLETGMG
KTITITSEGK DAQAALDAIS ALIDAKFDEA V
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