Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3299 |
Symbol | |
ID | 4920800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3943535 |
End bp | 3943786 |
Gene Length | 252 bp |
Protein Length | 83 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640164911 |
Product | BolA family protein |
Protein accession | YP_001095424 |
Protein GI | 127514227 |
COG category | [K] Transcription |
COG ID | [COG5007] Predicted transcriptional regulator, BolA superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.76546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.122982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATGTA ATGAGATTGA ACAGCTGCTT AGCCAAGCGC TGACACTGGA TGAAGTACAC GTGAGCCAGG ATGGGACACA CTATAAGATT GTTGCCGTCG GTGAGTGTTT CGACGGTGTG AGCCGCGTGA AGCAACAGCA GATGATCTAC GGCCCTTTGA TGGAACATGT GACCAGTGGG GCGCTGCATG CCATCACTAT CAACGCCTTT ACCCCTACGC AGTGGAAGCG TGAAAAAATC TTCAACATGT AA
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Protein sequence | MECNEIEQLL SQALTLDEVH VSQDGTHYKI VAVGECFDGV SRVKQQQMIY GPLMEHVTSG ALHAITINAF TPTQWKREKI FNM
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