Gene Shew_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3299 
Symbol 
ID4920800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3943535 
End bp3943786 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content50% 
IMG OID640164911 
ProductBolA family protein 
Protein accessionYP_001095424 
Protein GI127514227 
COG category[K] Transcription 
COG ID[COG5007] Predicted transcriptional regulator, BolA superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.76546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.122982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGTA ATGAGATTGA ACAGCTGCTT AGCCAAGCGC TGACACTGGA TGAAGTACAC 
GTGAGCCAGG ATGGGACACA CTATAAGATT GTTGCCGTCG GTGAGTGTTT CGACGGTGTG
AGCCGCGTGA AGCAACAGCA GATGATCTAC GGCCCTTTGA TGGAACATGT GACCAGTGGG
GCGCTGCATG CCATCACTAT CAACGCCTTT ACCCCTACGC AGTGGAAGCG TGAAAAAATC
TTCAACATGT AA
 
Protein sequence
MECNEIEQLL SQALTLDEVH VSQDGTHYKI VAVGECFDGV SRVKQQQMIY GPLMEHVTSG 
ALHAITINAF TPTQWKREKI FNM