| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3298 |
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| Symbol | |
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| ID | 4920799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3942260 |
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| End bp | 3943519 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164910 |
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| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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| Protein accession | YP_001095423 |
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| Protein GI | 127514226 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
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| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.203171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0317572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAAAT TAACAATTCA GGCCAGTGGT GCACTGGCCG GTGACGTGGT GATTTCTGGC
GCCAAGAACG CCGCCCTGCC GATCCTGATG GCCGGCGTGC TGGCCGAGAC AGACTTCGTG
GTCAGCAACG TGCCTAACCT GAGGGACGTC AACACCAGCT GTGAGCTGCT GCGCTGTCTT
GGTGCCGAGG TGAGCCGTAG CGACGAGGGT AAGATCACCA TCTCTACCAC CCATCTCAAC
GAGTTCTGCG CGCCCTATGA GCTAGTGAAG ACCATGCGCG CCTCTATCTT GATCTTGGGG
CCCTTGCTGG CTCGCTACGG CACCGCCGAC GTCTCTCTAC CCGGTGGCTG CGCCATCGGC
GCCCGCCCGG TTAACCTGCA CCTGCATGGT CTGGAGCAGA TGGGCGCGAA GATCGAAGTG
AAAGAGGGCT ATATCAAGGC CCGCGTCGAT GGTCGTCTCA AGGGCGCCCA TATCTTCATG
GACATGATCA GCGTCGGTGC CACAGAGAAC CTGCTGATGG CGGCGGCCCT GGCCGATGGC
GAGACGGTGA TCGAGAACGC GGCCCGTGAG CCAGAAGTTA TCGATCTGGC CAACTGCCTT
AACGCCATGG GCGCTAAGAT TAGCGGTGCA GGTAGCGATA CCATTCGCAT CCAGGGTGTC
GAATCCCTTA GCGGCTGCGA ATATCGCGTG ATGCCAGACC GTATCGAGAC AGGTAGCTTC
CTGGTGGCCG CGGCGGTAAC CAAGGGCAAG ATACGTTGTG TCGATGCCGA TCCTAAGACC
CTGGAGGCCG TGCTCGCCAA GCTGGAAGAT GCTGGCGCCA GCATCACCAC GGGGGAAGAT
TGGATCGAGC TGGACATGCA GGGCCAACGT CCCAAGGCGG TCAACATCAA GACCATGCCT
TACCCAGGTT TCCCGACGGA CATGCAGGCG CAGTTCTGTG TACTTAATGC CCTGGCGGAA
GGTACGGCGA CCATTACCGA GACCATCTTC GAGAACCGTT TCATGCATGT GCCCGAGCTT
ATCCGTATGG GCGCCAACAT GGAGCTGGAA GGCAATACCT GTATTATCAA GGGTTGTGAG
CTGCTTAACG GCGCTCAGGT GATGGCGACG GATCTGCGCG CCTCGGCGAG CCTGGTGATT
GCCGGCCTGG TGGCCGACGG GGTGACCACG GTAGATCGTA TCTATCACCT CGATAGAGGC
TACGAGCATA TCGAAGATAA GTTTAAGGGC CTGGGCGGCG AAGTCGTACG GGTCAGCTAA
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| Protein sequence | MDKLTIQASG ALAGDVVISG AKNAALPILM AGVLAETDFV VSNVPNLRDV NTSCELLRCL
GAEVSRSDEG KITISTTHLN EFCAPYELVK TMRASILILG PLLARYGTAD VSLPGGCAIG
ARPVNLHLHG LEQMGAKIEV KEGYIKARVD GRLKGAHIFM DMISVGATEN LLMAAALADG
ETVIENAARE PEVIDLANCL NAMGAKISGA GSDTIRIQGV ESLSGCEYRV MPDRIETGSF
LVAAAVTKGK IRCVDADPKT LEAVLAKLED AGASITTGED WIELDMQGQR PKAVNIKTMP
YPGFPTDMQA QFCVLNALAE GTATITETIF ENRFMHVPEL IRMGANMELE GNTCIIKGCE
LLNGAQVMAT DLRASASLVI AGLVADGVTT VDRIYHLDRG YEHIEDKFKG LGGEVVRVS
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