| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3293 |
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| Symbol | rpsI |
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| ID | 4920794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3936731 |
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| End bp | 3937123 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164905 |
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| Product | 30S ribosomal protein S9 |
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| Protein accession | YP_001095418 |
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| Protein GI | 127514221 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0103] Ribosomal protein S9 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000148641 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00108393 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTGCAA CTCAGTACTA CGGCACTGGC CGTCGCAAAA CATCTACTGC TCGCGTATTC
GCTAAAGTAG GTAGTGGTAA CATCGTCGTG AACCAACGTC CACTTGACGA ATATTTTGGT
CGTGAGACTG CTCGTATGGT TGTTCGTCAA CCTCTAGAGC TAGTTGAAAT GACTGAAAAG
CTAGACATCT ATGTAACTGT TAAGGGCGGT GGTATCACTG GCCAAGCAGG TGCAATCCGT
CACGGTATCA CTCGTGCCCT GATGGAGCTT GATGAAGCTC TACGTCCATC TCTACGTGCC
GCTGGTTTCG TTACCCGTGA TGCTCGTAAA GTTGAGCGTA AGAAAGTCGG TCTACGTAAA
GCACGTCGTA AGCCACAATT CTCAAAGCGT TAA
|
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| Protein sequence | MSATQYYGTG RRKTSTARVF AKVGSGNIVV NQRPLDEYFG RETARMVVRQ PLELVEMTEK
LDIYVTVKGG GITGQAGAIR HGITRALMEL DEALRPSLRA AGFVTRDARK VERKKVGLRK
ARRKPQFSKR
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