| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3285 |
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| Symbol | |
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| ID | 4921121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3927228 |
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| End bp | 3927971 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164897 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095410 |
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| Protein GI | 127514213 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3137] Putative salt-induced outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0505048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000246536 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTAAGAG CAACAAGTTT ATTTATCACA CTCGGCCTCA GCCACAGCGC CTGGGCATTG
GTGCCCCCGG ACTATCAGGA ACCCCCCAGC GACTTCTCTG CCGAGATAGA GGCCGGCCTG
CAGATCAACA CGGGTAACAC AGAATCCAGC AGCTTCAACG GCCGCACCAA ACTCGTCTAC
GACACAGACA AGTTTCGTCA GGAAGGGGTC TTCAAGGCCT ACTTCGCCTC CGACTCGGAA
AAAACCACCT CGGAGAAGTA CGATGTCCAG CTCCAATCGA GCTACAAGAT CTACTCAGGC
TATATCTTCG CCCGCGGTGA TTTCACCGAA GACAGATTTG GTAGTTATAC CCGCATCTCC
ACAGTGTCGA CCGGTTATGG TTTCGACGCC ATCAGCGGCG ACAGCACTAA GCTGAGTCTC
GAAGTCGGTC CAGGTTATCG ATACAACCTG CCCCAGGTGA GTGAGTCAGT GCCCGACCCC
GAGGCCGACC GCGAGATCAT TCTGCGTACC GCCGCCAAGT TCGAGCAGAA AATCCACGAA
TACACCAGCT TCAACGCCGA CCTCACCGCC GAGACCGGCG AGGCCAACAA TACCGTCACC
CTGGATATGA GTTACAAGAA CACACTATTC CAGGACTGGG CGTTTAAAAT CGGCATGAAC
ATCAAGTACA CGGAAGTGGT ACCAGAAGGG TCGAAGCAAA CAGATACAGT CACTACCTTT
AATCTGCTGT ACACCTTTAA GTAA
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| Protein sequence | MLRATSLFIT LGLSHSAWAL VPPDYQEPPS DFSAEIEAGL QINTGNTESS SFNGRTKLVY
DTDKFRQEGV FKAYFASDSE KTTSEKYDVQ LQSSYKIYSG YIFARGDFTE DRFGSYTRIS
TVSTGYGFDA ISGDSTKLSL EVGPGYRYNL PQVSESVPDP EADREIILRT AAKFEQKIHE
YTSFNADLTA ETGEANNTVT LDMSYKNTLF QDWAFKIGMN IKYTEVVPEG SKQTDTVTTF
NLLYTFK
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