| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3282 |
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| Symbol | rpsR |
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| ID | 4921118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3926044 |
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| End bp | 3926271 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640164894 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001095407 |
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| Protein GI | 127514210 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0561913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000203056 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAGTTC TGCCGTTTCA CTGCAGAAGG CGTTACTGAG
ATCGATTACA AAGATATCGC TACTCTAAAG AACTACATCA CTGAAAGTGG TAAAATTGTT
CCTAGCCGTA TCACTGGTAC AAACGCTAAA TACCAACGTC AACTGGCTCG CGCTATCAAG
CGTGCTCGTT ATCTTTCTCT ACTGCCTTAC ACTGATCTAC ATCAGTAA
|
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| Protein sequence | MARYFRRRKF CRFTAEGVTE IDYKDIATLK NYITESGKIV PSRITGTNAK YQRQLARAIK
RARYLSLLPY TDLHQ
|
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