| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3279 |
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| Symbol | |
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| ID | 4921115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3922738 |
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| End bp | 3924942 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164891 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095404 |
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| Protein GI | 127514207 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00632369 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000414607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCGCAAAG CATTGGTTGC AGCCTTAATG CTGTCATCTG GCGTAGTGAT TGCCGATGAA
GGGCAATGGC AACCGTATCA AATGCCTTCG ATCGCCGACA AGCTGAGCGA ACGCGGTATC
CAAATTCCAG CAAAACAACT CGCCGATCTG ACCCAATATC CGATGAATGC AGTTGTCGGA
CTAGGGTATT GTACCGCCAG TTTCGTGTCC CCCCAAGGGT TAGTTGTAAC GAATCACCAC
TGTGCCTACC GCGCAATTCA ATACAACAGC AAGAAAGAGC ACAACTACAT CGCCGATGGC
TTCCTGGCGC GCAAACAAGC GGACGAACCT TCTGCCGGCC CTAACGAACG TCTCTACATC
ACAGAGGCGG TCACCAACGT GAGTGAACAG GTCACCAAAG AGCTCAGCGA CGACCCGTTG
AAACGCTATG AAGAGATCCA GGCCAACCGT AAGGCACTGA TCAAAGAGTG TGAGAGCGAC
GACAACTATC GCTGCTCGGT GCGCAGCTTC CATAACGGTC TGGAATACTA CCTGATCAAG
CAGCTGATCA TTCGCGACGT GCGCTTGGTG TACGCGCCAC CTAAGAGCGT CGGCTCCTTC
GGCGGCGATA TCGACAACTA CGAATACCCA CGCCACTCGG GCGACTTCAC CTTCCTGCGC
GCCTATGTGG GCAAGGATGG CAAGCCAGCG GCCTACTCGC CTGACAACGT GCCCTTCAAG
CCTAAGAGCT ACCTGAAGAT CAACGCCGAT GGCGTCAAGG CTGGCGACGG TGTGTTCGTG
GCCGGTTACC CGGGCTCGAC CAGCCGCTAC CGCCTCACCA GCGAGCTGAA GTTCGCCAGC
GACTGGCTCT ACCCTACCCT GGCCAAGCGT TATCAGCAGC GCATCGACAC CATAGAAGCC
ATGGGTGCAC AGGACGCAGG CGTTAAGATC AAGTACGCAG GCACGCTGGC CTCTATGGCC
AACCGCATGA AGAAATATAA CGGTCTGCTC GACGGCTTCA AGGCCACCGA TATCGCCGGC
ATCAAGCAGG GTCGTGAGGA TGACTTCCGC AAGTGGCTAA GCACTGACAG CCAATACCAG
AGCTATCAGG CCAAGTTTGA CCAGCTGGAG ACTCTGCTAG TGGAGCAGCG CCAGGCGCAG
CAGACGCGCT ACTTCTTCGA GAACGCCCAA TCGAGCGACC TGCTCTCTGC AGCCAACCGC
CTCTACCGTC TGGCCAAAGA GAAGACCAAG CCAGATGCCG AGCGTGAAGA GGGCTACCAG
GAGCGCGACA TGAAGATGTT CAAGGCGCGC CTCAAGCGTA TCGACTCAAG CTTCGCCATC
AGCGTCGACA AGACCCTATG GATGCAAGAT CTCGACGCCT ATCTGGCCCA GGACAACCGC
GTGCCTGAGC TAGACGCCAT GCTGAAATCG GACGATGCAG AGGTGAGCCT GAGTGACAAG
CTGGATGGCC TCTACTCGCT GACCGGCCTC ACCAACCAGG ATGAGCGTCT GGCCTGGATG
GACGCCGATG TGAAGGCGTT TGAAACCAGC GCCGATCCTT TCATCCGCAT CGCCGTGGCC
CTGTACGACA CCAACCTAGC CCAGGAAAAA GCCAAGAAGA CCCTGGCCGG AAAGCTGTCT
AAGGCACGTC CTGGCTACAT GGAAGCCGTG ATCGCCTACT ACAAGGCCAA CAACTGGCCG
GTATACCCAG ATGCCAACGG CACCCTGCGT ATCACCTACG GCATGGTGGA TGGTTACCAG
TCGAAAGATG CCCTCTACAA GCAGCCATTC ACCCGTCTGG AAGGCATAGT CGCCAAGCAC
ACGGGCGTCG AGCCGTTCGA TGCACCTCAA AAGGTACTGG ATGCCATCAA GGCCAAGCGT
TACGGCAGCC ACAAGGTCGA GTCTGTCTAT CAAGACCCAG CCTCTTGGCT GTGCCGCCTC
TTCTCTTGCC TGGATAAGCC GGAAAGCTTC GGCTCTGTGC CGGTGAACTT CCTCTCAAGT
GTCGACACTA CAGGTGGTAA CTCGGGCTCT CCTGTGTTTA ACGGCAAGGG CGAACTGGTG
GGGCTAAACT TCGACTCTAC CTATGAGGCC ATCACCAAAG ACTGGTTCTT CAACCCGACC
ATCACCCGCG CGGTGCATGT GGATTTCCGC TACATTCTGT GGATGATGGA TGAGGTGGAT
CACGCCGACA ACCTGATGGG CGAGCTGGAA CTAGTCAGAA ACTAG
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| Protein sequence | MRKALVAALM LSSGVVIADE GQWQPYQMPS IADKLSERGI QIPAKQLADL TQYPMNAVVG
LGYCTASFVS PQGLVVTNHH CAYRAIQYNS KKEHNYIADG FLARKQADEP SAGPNERLYI
TEAVTNVSEQ VTKELSDDPL KRYEEIQANR KALIKECESD DNYRCSVRSF HNGLEYYLIK
QLIIRDVRLV YAPPKSVGSF GGDIDNYEYP RHSGDFTFLR AYVGKDGKPA AYSPDNVPFK
PKSYLKINAD GVKAGDGVFV AGYPGSTSRY RLTSELKFAS DWLYPTLAKR YQQRIDTIEA
MGAQDAGVKI KYAGTLASMA NRMKKYNGLL DGFKATDIAG IKQGREDDFR KWLSTDSQYQ
SYQAKFDQLE TLLVEQRQAQ QTRYFFENAQ SSDLLSAANR LYRLAKEKTK PDAEREEGYQ
ERDMKMFKAR LKRIDSSFAI SVDKTLWMQD LDAYLAQDNR VPELDAMLKS DDAEVSLSDK
LDGLYSLTGL TNQDERLAWM DADVKAFETS ADPFIRIAVA LYDTNLAQEK AKKTLAGKLS
KARPGYMEAV IAYYKANNWP VYPDANGTLR ITYGMVDGYQ SKDALYKQPF TRLEGIVAKH
TGVEPFDAPQ KVLDAIKAKR YGSHKVESVY QDPASWLCRL FSCLDKPESF GSVPVNFLSS
VDTTGGNSGS PVFNGKGELV GLNFDSTYEA ITKDWFFNPT ITRAVHVDFR YILWMMDEVD
HADNLMGELE LVRN
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