| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3274 |
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| Symbol | |
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| ID | 4921307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3916948 |
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| End bp | 3917961 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640164886 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001095399 |
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| Protein GI | 127514202 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.589751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000424173 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAATGC TTCCCACACA CTATACCCAT GTGCAATTTA ACGCCCCTGG TGGGCCCGAG
GTGCTGGAGT TGGCGCAGAG TCCCTTGCCC GAATTCGCGC CGGATCAGCT GCTGATCAAG
GTGGAATACG CCGGGGTGAA TGGCCCGGAT ATCGCCCAGC GCCGCGGCCT CTATCCACCG
CCGCCCGGTG CCAGCGAGAT CTTGGGGTTG GAGGTATCGG GGACAGTAGT AGCCGTGGGC
GATGCGGTGA CCGGCTGGCA GTTGGGGGAC AGGGTGTGCG CCCTGGTACC CGGCGGTGGC
TATGGCGAGT ATGTGACGAC CTGGGGCGTG CACTGCCTGC CTATTCCCAC AGGAGTGACC
ATGGCCCAGG CGGCGGCCCT GCCAGAGACC TTCTTCACCG TGTGGGGACA CATGTTCATG
CGCGGCGGCC TTAAGGCGGG TGAGACTGTG CTTATTCATG GTGGCTCGGG CGGTATCGGC
TCGGCGGCGG TCACCTTAGC GAAACAATTC GCTGTTAAGG TGCTGGTCAC CTGCGGCTGT
CAGGAGAAGA TTGACTACTG CCTCGCCCTG GGGGCCGACC ACGGCTTTAA CTACCACGAC
GAGGATCTGC TGGCTCAGAT AAAGGCGGTG GCGCCTCAAG GGGTAGATCT GGTGCTGGAT
ATGGCCTCGG GTGACCTTAT CGATCTTAAC CTCAAGGCGC TGGCAATCGA GGGGCGCCTG
GTCACCATAG CCCTGCAGCG GGGTAGGCGC GCCGAGGTGG ATGTGGCGCT CTTGATGGCC
AAGCGTATCT GCTGGACGGG GGCGACCCTG AGGCCGCAAT CGGTGGCGGC TAAGCAGGCG
ATCGCCGATG GCCTGCGTGA GCAGGTGTGG CCTAAGTTTG ACACCCAGGA GGGCTGCAGC
CTGGTACCTC ACCTGTATGC CGAGTTTGCA CTGGGTGATG CGGCCAAGGC CCACGCCCTG
ATGGAGTCGG GGCAACACAG AGGAAAGCTG GTGCTCAAGG TGGCGAATGA CTAG
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| Protein sequence | MSMLPTHYTH VQFNAPGGPE VLELAQSPLP EFAPDQLLIK VEYAGVNGPD IAQRRGLYPP
PPGASEILGL EVSGTVVAVG DAVTGWQLGD RVCALVPGGG YGEYVTTWGV HCLPIPTGVT
MAQAAALPET FFTVWGHMFM RGGLKAGETV LIHGGSGGIG SAAVTLAKQF AVKVLVTCGC
QEKIDYCLAL GADHGFNYHD EDLLAQIKAV APQGVDLVLD MASGDLIDLN LKALAIEGRL
VTIALQRGRR AEVDVALLMA KRICWTGATL RPQSVAAKQA IADGLREQVW PKFDTQEGCS
LVPHLYAEFA LGDAAKAHAL MESGQHRGKL VLKVAND
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