| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3265 |
|---|
| Symbol | |
|---|
| ID | 4921298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 3903830 |
|---|
| End bp | 3904153 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640164877 |
|---|
| Product | CutA1 divalent ion tolerance protein |
|---|
| Protein accession | YP_001095390 |
|---|
| Protein GI | 127514193 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1324] Uncharacterized protein involved in tolerance to divalent cations |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.189693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00423146 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAA AATGTCTACT CGTCACCACC AGCTGCCCGG ACAATGAGAC GGCCAGCATC
CTGGCCCGCG CCTTAGTGGA AGCCAAGCTG GCGGCCTGTA TTCAGATCTC CGCCCCCGTC
ACCTCACTCT ACACCTGGGA GGGTGAAGTG TGCCAGGAGA CAGAGGTGTG CCTGCAGATA
AAATGTCTCG CCCGTCATTA CGACAAGCTG GAGCAACTCC TCTTGTCGCT GCACCCCTAC
CAAGTTCCCG AGCTGATCGC CACAGAGATC CACACAGGTT CGGCGGCTTA CTTAGCATGG
ATAAAAGAAA CCTCACTATC ATGA
|
|---|
| Protein sequence | MQEKCLLVTT SCPDNETASI LARALVEAKL AACIQISAPV TSLYTWEGEV CQETEVCLQI
KCLARHYDKL EQLLLSLHPY QVPELIATEI HTGSAAYLAW IKETSLS
|
|---|
| |