| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3259 |
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| Symbol | |
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| ID | 4921336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3896461 |
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| End bp | 3897849 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640164871 |
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| Product | heavy metal sensor signal transduction histidine kinase |
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| Protein accession | YP_001095384 |
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| Protein GI | 127514187 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00819393 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0763736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACCC GTCATCCTCA GATCTCACTC AAAACCCGTA CTCTCTATTT AGTGGGCGGC
ACACTGCTCG CCTGCTTCCT GCTGCTTGGG GTCATGATCG ATTCTCAGGT CAAAGGGCAT
TTCCTACATC AGGATGAGGA TGAGCTGAAC GTAGTGGCAG ACTCGGTGAA GGGAATGCTG
AGCTCACTGT CTAAGCCTCA AGATCGCCAT CAGATTGATA ACTCCCTCTC CCAGGCGGTT
GTCGGCCATC ACGGCATCTT TTATGCGCTT TACAATAATG ACAATCAGTT GATTTATAGC
AATAAAGACT CTGATCTTTC CCATTTTCTC CTGCTAGATG CCAAAGAACG CGTCAAAGCC
TCAGCCTTAG TTGTCGTTGA AGTACAAGAG CAACACTTAC GAGGCGCCCT GCTCGGGGTG
ACGCTTCCCG ATGGGCGGAG CGGCAAGTTA GTCGTTGCCA ACGACATCGA CTTTCACCTG
GCATTTCTAA GCGAATTTCA CCGGACACTC TGGTCGACAC TGTTTCTGGT TTGGCTCTTA
ACCATATTGG CAGCTTGGCT GGCCATAAGG TTCGGACTGC GGCCACTGCA ACGATTGAGT
AAAGAGATCA GTGGCATAAC TACCGAACGC CTAGATCTGA GATTGAAACC CGAATTAGCC
CCCATTGAAT TATCGGAATT GATCGCCGCC TTCAATCACA TGATTGGTGA AGTTGAACTC
GGTTTCAAAC GCCTTAGCCA CTTCTCGGCG GATATCGCCC ATGAGCTTAG GACACCACTC
ACGGCATTGG CGATGCAGAA TGAAGTCCTA TTGAGTCAGT CTCGCAGCAC TGAGGAATAT
CAAGAATTAA TTTATTCCAA CCTGGAAGAA TTGGAGCGAC TCACCGTCAT GGTCAATGAT
ATGTTGTGGC TGGCGAAATC GGACAATGGA TTAATTGAGC CCAAGAAACA AAAAATTGCA
CTGGATAAAG AGGCCGACAA GGTGATCGAC TATCTAAGTG TACTCGCCGA TGAAAAAAAT
GTATCCATCG TCAGAGATGG CAGTGGCGAG ATCTATGCCG ACAACGGAAT GATGCAGCGG
GCGCTGAGTA ACCTCATAGG TAACGCCGTT CGCCATGCCG AGCCCGGATC TGAAATAACC
GTCGGCATAG CACAAACCCC TGAGGCGACA TACGTGAAGG TCAATAATCT GGGAACGCCC
ATCCCTGAGC AGCATGTCAA CCACCTGTTT GACCGCTTCT ATAAAGTCGA AGCGGCCAGA
CAAAGAGAAG GTAGCAGCAC AGGCCTGGGC CTGGCTATCG TCAAGTCTAT TGCGGATATA
CACGGCGGAA AGGTTAGCGC TAGGAGTCGC GACGGCAACA CCTGTTTCAC TCTGACGCTG
CCAAAATGA
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| Protein sequence | MFTRHPQISL KTRTLYLVGG TLLACFLLLG VMIDSQVKGH FLHQDEDELN VVADSVKGML
SSLSKPQDRH QIDNSLSQAV VGHHGIFYAL YNNDNQLIYS NKDSDLSHFL LLDAKERVKA
SALVVVEVQE QHLRGALLGV TLPDGRSGKL VVANDIDFHL AFLSEFHRTL WSTLFLVWLL
TILAAWLAIR FGLRPLQRLS KEISGITTER LDLRLKPELA PIELSELIAA FNHMIGEVEL
GFKRLSHFSA DIAHELRTPL TALAMQNEVL LSQSRSTEEY QELIYSNLEE LERLTVMVND
MLWLAKSDNG LIEPKKQKIA LDKEADKVID YLSVLADEKN VSIVRDGSGE IYADNGMMQR
ALSNLIGNAV RHAEPGSEIT VGIAQTPEAT YVKVNNLGTP IPEQHVNHLF DRFYKVEAAR
QREGSSTGLG LAIVKSIADI HGGKVSARSR DGNTCFTLTL PK
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