Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3254 |
Symbol | |
ID | 4921331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3891675 |
End bp | 3892235 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640164866 |
Product | cytochrome c family protein |
Protein accession | YP_001095379 |
Protein GI | 127514182 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00276753 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.22329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGA GAGTAACGAT TTTTGCCAAG AGTCTGTTGA TAGTCGGGCT GTTGGGCGTG GTGATGTTGG CAGGGTACCT GTACTCGGGT CTTTATCCCA TTGGTGCAGA TACGCCGCAC AACAAGTTGA CCTTTTGGGC ATTGGAGACC CTGAGAGAAA ACTCGGTGGC GCGCGCGGCA AAAGCGATCC AAGTCCCTGC CGACTTAGGA ACGCCCTCAC GACTGTTAGC GGGTGGTCCC GATTACAATG AGATGTGTTC TGGGTGTCAT CTCAGGCCGG GGCGGACTCA GAGTGATTTC ACTCAGGGGC TTTATCCCTC GCCGCCCAAC CTGAGTCGCC TAAAGGCGGG TGAAGAGGAT ATTGCTCAAA GACGTAAAGA GCACTTTTGG ATCATCAAAC ATGGCATCAA GGCCTCTGGA ATGCCTGCCT GGGGGCCGAC CCATGATGAT GAGCGGATCT GGAACATGGT GGCCTTCCTG GAGCGATTGC CCGAGCTATC TTCGGAGCAG TATCAGATCC TGACGGCAAG AGGGGAGCAA GACAGCGGCG GTCATCACTG A
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Protein sequence | MASRVTIFAK SLLIVGLLGV VMLAGYLYSG LYPIGADTPH NKLTFWALET LRENSVARAA KAIQVPADLG TPSRLLAGGP DYNEMCSGCH LRPGRTQSDF TQGLYPSPPN LSRLKAGEED IAQRRKEHFW IIKHGIKASG MPAWGPTHDD ERIWNMVAFL ERLPELSSEQ YQILTARGEQ DSGGHH
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