Gene Shew_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3254 
Symbol 
ID4921331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3891675 
End bp3892235 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content55% 
IMG OID640164866 
Productcytochrome c family protein 
Protein accessionYP_001095379 
Protein GI127514182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00276753 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.22329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGA GAGTAACGAT TTTTGCCAAG AGTCTGTTGA TAGTCGGGCT GTTGGGCGTG 
GTGATGTTGG CAGGGTACCT GTACTCGGGT CTTTATCCCA TTGGTGCAGA TACGCCGCAC
AACAAGTTGA CCTTTTGGGC ATTGGAGACC CTGAGAGAAA ACTCGGTGGC GCGCGCGGCA
AAAGCGATCC AAGTCCCTGC CGACTTAGGA ACGCCCTCAC GACTGTTAGC GGGTGGTCCC
GATTACAATG AGATGTGTTC TGGGTGTCAT CTCAGGCCGG GGCGGACTCA GAGTGATTTC
ACTCAGGGGC TTTATCCCTC GCCGCCCAAC CTGAGTCGCC TAAAGGCGGG TGAAGAGGAT
ATTGCTCAAA GACGTAAAGA GCACTTTTGG ATCATCAAAC ATGGCATCAA GGCCTCTGGA
ATGCCTGCCT GGGGGCCGAC CCATGATGAT GAGCGGATCT GGAACATGGT GGCCTTCCTG
GAGCGATTGC CCGAGCTATC TTCGGAGCAG TATCAGATCC TGACGGCAAG AGGGGAGCAA
GACAGCGGCG GTCATCACTG A
 
Protein sequence
MASRVTIFAK SLLIVGLLGV VMLAGYLYSG LYPIGADTPH NKLTFWALET LRENSVARAA 
KAIQVPADLG TPSRLLAGGP DYNEMCSGCH LRPGRTQSDF TQGLYPSPPN LSRLKAGEED
IAQRRKEHFW IIKHGIKASG MPAWGPTHDD ERIWNMVAFL ERLPELSSEQ YQILTARGEQ
DSGGHH