| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3250 |
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| Symbol | |
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| ID | 4921327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3887555 |
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| End bp | 3888784 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164862 |
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| Product | peptidase T |
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| Protein accession | YP_001095375 |
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| Protein GI | 127514178 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2195] Di- and tripeptidases |
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| TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.124767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.62095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGG CCCTGTTAAA TCGATTCTTA CGCTATGTGC AATTTGATAC TCAGTCTGAC
GGGAGCCAAA GCTGCTGCCC CAGTACCCAG GGGCAGATGG CGCTGGCGGA TCAACTCAGA
GAGGAGCTGA TCAAGTTAGG CTTCAGTCAG GTAGCGCTTT CCGCTACTGG CTATCTGACG
GCCCTGGTGC CCGCGACAGT TGAAGGGGTT CCACCCATCG GCTTTATCGC CCACCTAGAC
ACGGCGCCCG ACTTTAGCGG TGCCAATGTT CGTCCTCAGC TGATCGAGAA CTATGATGGC
GGCGATATTT CCCTCGGCGC GCAGCATAGA CTCTCCCCCG AGGAGTTTCC CGAGTTAGAT
CACTACCTGG GACAGACGTT GATCACCACA GATGGCAGTA GTCTGCTGGG CGCCGACGAC
AAGGCGGGGA TCGCCGAGAT CATCACAGCG CTATCGACCC TTCTGCAAGA TCCCGACAGT
CGCCATGGCG ATATCTATCT CTGTTTCACG CCGGATGAGG AGATAGGGCG CGGCGCCGAT
AAGTTTGACT TCGACGCCTT CAAGGCCGAG TGGGCCTACA CGGTAGATGG CGGCGAGCTA
GGTGGGCTGG AGTTCGAAAA CTTCAACGGC GCCACGGCCG TGGTGACCGC CAAGGGCAAC
AACTGTCACC CGGGTTCGGC CTACGGCGTC ATGGTCAACG CCCAGACCAT GGCGGCGCGT
TTTCATGCCA AGATGCCCCT CGGTGATACC CCGGAGAACA GCCTGGATTA CGCCGGATTC
TTCCATCTTA TTGAGATGAA GGGGGTGACC GAAGAGGCGC AGCTCACCTA TCTGATCCGC
GATTTCGACC TTGACCAGTT TGAGCAGCGC AAGCGTTGGC TTGTCGAGCG GGTCGAGGCC
TGCGATGCTC AGCTGCAGCA GGGCTCATTA AGCGTCAGCA TCACAGACAG CTACTACAAT
ATGCGCGATC AGCTGATCCC CCATCCCCAT ATCGTCGAGA TCGCCAAGCA GGCGATGACT
GACCTTGGTA TTACTCCCAA GATCAAACCT ATCCGCGGCG GCACCGATGG CAGTCGTCTC
TCCTACATGG GGCTGCCTTG TCCTAATCTG TTTACCGGTG GCCATAACTT CCATGGCAAG
CATGAGTTTA TCTGCCTGGA ATCTATGGTG AAGGCGACCG AGGTGATCAT GGCGATCTGT
CAGCTGACGG CCAAGCAGCT GAAAGCCTGA
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| Protein sequence | MKQALLNRFL RYVQFDTQSD GSQSCCPSTQ GQMALADQLR EELIKLGFSQ VALSATGYLT
ALVPATVEGV PPIGFIAHLD TAPDFSGANV RPQLIENYDG GDISLGAQHR LSPEEFPELD
HYLGQTLITT DGSSLLGADD KAGIAEIITA LSTLLQDPDS RHGDIYLCFT PDEEIGRGAD
KFDFDAFKAE WAYTVDGGEL GGLEFENFNG ATAVVTAKGN NCHPGSAYGV MVNAQTMAAR
FHAKMPLGDT PENSLDYAGF FHLIEMKGVT EEAQLTYLIR DFDLDQFEQR KRWLVERVEA
CDAQLQQGSL SVSITDSYYN MRDQLIPHPH IVEIAKQAMT DLGITPKIKP IRGGTDGSRL
SYMGLPCPNL FTGGHNFHGK HEFICLESMV KATEVIMAIC QLTAKQLKA
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