| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3237 |
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| Symbol | |
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| ID | 4921521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3863407 |
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| End bp | 3867945 |
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| Gene Length | 4539 bp |
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| Protein Length | 1512 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164847 |
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| Product | Na-Ca exchanger/integrin-beta4 |
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| Protein accession | YP_001095362 |
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| Protein GI | 127514165 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATCA AAAAGTCAAC ATGGCAAGGC TGCAGCTCTG TGGGGCTAGC GGGATTATTG
GCGACGGTCA GCGCCTTTTC TTGTGCAGCC AGCTCTCCGG TCGTCGGGGA GTCATTGAAC
CAAGCGTCGT CGACACCTTT GGTGAAACTC GCCAACAAGA TGCTGGTGAG TAATAAACTA
AAATTCCAAC CGACAGCTCA GACCAAACTG GCCAAACCTA GCATCTCGGC GTCGAACCAG
GCGCTGATGG AAGCCCAATA CCAGGAGCAG ATGGCCTCGG CCGTGGCACT GGAACAGTAC
AGCGACACCG CGGTGCAAGC CGAGCCAGGC TCGGGCGCCA TGCCGGCCCC CGAGCTGAAC
TTCGATGGCC TGACCCGTAG CGGTTTCGAT GAGGCACCAA TGCCTGATGC GGCGGGCGAT
GTCGGCCGTG ACCACTATGT TCAGGTGGTT AACATGGCGT TTGCCGTGTG GGACAAAGAG
GGTAACCTGC TGGTTGACCG CACCCCGATG ACAGAGTTCT GGAAGCGTCT GGGCGGTGTC
TGTGGCGACC CTAATGCCAA CCCGGCTCCC GCTAAACCCT GGGAGAGCCC GACCACTGAG
CGTGAGCCTA TCGTGCTTTA CGATCAGCTC GCCGACCGCT GGGTCGTGAC CCAAAACGCC
TATGTCTCGG GTAAAGAGAG CCGTCAGTGT TTCGCCGTCT CAAAGACCAG CGATCCTACC
GGCGACTGGC ATCTGTATGA ATTTGAATTA AACGGCGACA AGTGGCACAA CGGCGCCCAG
CTCGGCGTAT GGAGCGACGG TTACTATCTG TCGGCCAATC AACACAACAA GAGCGACAAC
AGCAAAGCCG GCACCGCCGC CGTGGTGTTT GAGCGTGACA AGATGCTCTA CGGCGTACCC
GCACGTTCTA TCTATTTCGA TGCGCCGCTG ACAGCTAACC TGCTGCCGGT GGATCTCGAC
GGTAAGCGCG CCCCTGCCGC CGGTACCCCT AACTACTTCC TCAGCCTGCA GGACGACAAG
GTCCATGGCA GCGCCCAGGA TGAGATCCAG GTGTGGGCCT TCAAGGCCGA CTGGAACAAC
CCGCAAAACA GTCAGTTCAG CCAGGTTGCC GCGCTGGCGA CCGAGCCATT CGATATCAAT
GAGGCCTGTG GCAATACCTG TATCGAGCAG GATTCCTGGG GCGGCGATTC TTACAACGCC
CTGAAAGCCT ACCAGGATAA GCTGATGTAC CGCGCCGCCT TCAGACAATT TGGCGATCAC
CAGAGCCTGG TGGTTAACCA TACGGTTGAC GTGGGCGAGC AACACTTCGG CGTACGTTGG
TATGAGATCC GCAACCTGGG TGCAGGTGCC GAGATCTTCC AGCAGGGCAG CTATGCCCCT
GATGTTAACC ACCGCTGGCT GGCGAGTATG GCGATGGATG CCTCGGGCAA CATAGGCATG
GGTTTTGCCA TCTCGGGTGA AGAGATGCTG CCTTCTGTAC GCTATACCGG TCGCCTGAAT
GGCGATCCAC TGGGTCAGAT CTCATTGGCT GAGCAGGTGC TGGTGGACGC CGAGGCGGCC
CAGGTGAACT CCTTCGATGG TCACTATGGT AAGCGCAGCA TGATGACAAT CGATCCGACG
GACGATTGTA GCTTCTGGTA TACCCAGGAA TATGGCGCCG ACCATGACTT CGAGTCTATG
TGGGCTACCC GTATCGGCAA GTTCAGCTTC CCTAACTGTG TGGCCGATCC TACCGGTATG
CTTCACGGTG TGGTGACCGA CAGCGTCACT GGCCTGCCAC TGGCGAACGC CGAAGTGGTT
GCCGGACCTT ACAGCACTGT GGCCGATGAG GAAGGTAAGT ATCAGCTGCA ACTGCCTGTG
GGTGATTATC AGGTGTCGGC CCGTGCCTAC GGTCATACCA AGGCGAGTCA GGGCAGTGTC
TCTGTGGCCA AGGATGCCGA TCTTGAGCGC AACGTGGTCT TGACCGAGAT GCCTCAGGTA
ACGATTTCGG GCAAGATCAG CGATGGTTCA GGCCACGGCT GGGGCGTACC CGGTGCGATC
AGCCAAAACG GTGAGCTGAT CCCTACTATG CCTATTGCTA CCGATGCGAT CGATGGCAGC
TTCAGCGTCG TAGGCTACGA AGGCTGGCCC GTGGCGATCA CCGCCCGTGC ACCTGGCTAT
CAGCCAGAGA CCATGGATCT GGTGCCTGGT AGCGATGGCG TGAGTGGTCT CGCCTTTAAC
CTGGCGGTAG ACAAGCAGGT CTGTAGCGCC CTGGGTTATC GCAAGATAGA TACCAATACC
GCATCACTGG TGAACTTTGA ATCGCCAGAC TTCCCGCCTC AGGGCTGGAC AGTGGTCGAT
GCCGCGGGTA CTGGCATTGT CTGGAAGACC AACGAGCAGT GGGAACGTCC TAACAACACC
ACGGGTGAGG GGCTTGCGGC CTCGATCGAC AGTGATAAGG GCGGCCGTAA GGCATACGAC
TCATCACTGT TAACGCCTAT CATGTCGGTC GCCGAGCTGG GCGGCTTCAC CACGGTGCGT
TTCAAGGAGG GCTTCCGCCC ATCCGGCGAC TCGGCCCTGG ACATGGATAT CAGCGTCGAT
GGCGGCGAGT GGCAGACCCT GCACTCGGCC AATGCCAGCG AACAAGGCAC TGTGGTTAAC
GTCGATATCG GCGAAGCCTT GGTGGGCGGT AGCAACTTCC GTCTGCGTTG GCGCTACCAT
AATGCCAACG AATTCGCCTG GGATTGGTGG GCGCAGATCG ACGATGTCGA GTTTGGTCTG
GGCTGCTCCA TGGAGCAGGG TGGTCTGGCC GTGGGTAACA TCACAGACGC CAACACCCAA
GAGGCGATCG CACAGGCCAA GGTATGGCTA GGCGATACTC AGGTAGCGAC CAACACCGAA
GGGCAATATC GACTGTTTGA AAGTGCTGGT AATCAGGTGA TCTCGGCAAC CCAGAGTGGC
TATGGCGTGA GCAACAGTCA GTTGACGGTT ACCGACAATA AGATTGCCGT ACAGCACCTT
AGCCTTAAGG CGGGTATGCT GGAAGTGGAC AAGCCAGAGC TTGCAGCAAC CGTGCGTAGC
GGTAAGCAGA GCGAGCTGAG CCTGACGGTG AAGAACGTAG GTAGCCGAGG AGTGAACTAC
CGACTGGGTG AACTGGCGGC GACCGTCGAG GGCGAGCTGG AAAATCCTGT GTTGGAAGCA
GAGCTTGGCT TTGGCGAGTC TATCGAGAAG TCTAGCCTGG GACTGGCGGT ACCCTACAGC
GCGACTATCG ACCGTAACAC CGGAGACCTC TGGGTTAACA ACGTTAAGTT GTTTGGTGGC
GACAATAAGC TGTATCGCTA TAGCGCCGAG GGTAAGCTAA TAGGTGAAGT GATCGACTTC
AGCGCCATGC TACCAGAAAA CGCTCTGGTG ACCGATCTGG CCTTCAACAG CCGCACCGGC
ATGTTGTGGC AGGCGGCGCT GTTTGCCGAC AACTGTATCC ATGAGATCGA TCCTAATAAG
CTGATGGTGA CAGGTAAGCG AATCTGCCCA GGCGTGGGTG GCATCTCGGG TCTGGCCTAT
GATCCTGTAT CGGGTGACTT CATCGCTGGT GTTTCTAACA AGATGAGCAT TAGTTACTTC
AACGAAGATG GCGAAGTGCA TCTGACCAAG GACGTCGGCA TTGCGCCTGC GGGTCTGGCC
TACAACTCGG CTACGGGACA CCTGTTTATC AGTACCAATG GTCCTGCAGA TCCCGGTTCA
GAGAAGGTGG ATCAGGCGCT GGATATCTAC ACTGTGGATA GCCATGACGA CTTCCGCATG
ATCGGCGCGC TCGATGTCCC TGGCATGAGC AACTATGGTC AGACGGGTCT GGATATCGAC
TGTGACGGCA ACCTGCGTCT GGTCGATATC GAAGGCAGCA AGATGTTCAC CGTCTCCTCT
GGTGAGACCG GCGTGTGCGA CCATAAGGAT GTGACCTGGC TTGACGTGTC TCACACCAGC
GGTCAGCTGA GTGTGGCCGG TGAGCAAGAG GTGACCTTCG ATGTCGATAC CAGCGACCTG
GCGCCTGGCG TGCATCAGGT ACAGCTACTG CTGCAAAGCG ATACTCCATA TGGTACTCAG
GCGATTCCGC TGTCACTGAC GGTAGAAGCC AAGGTGCCGG GCGCCGTGGG CTTTAAGGCC
ACAAGCTATG AGGTGAACGA GGCCGATGGC AGCGTGACCC TGATGGTTGA GCGTCTCGGT
GGTGTCGATG GTGAGGTGAG CGTTAACTAC CGCGCCGTCG ATGGTACAGC CACTGCCGGT
GAAGACTTCA CCCTGGCGGA AGGTACGCTG ATCTGGGCCG ACCAAGACGC TGCGGCCAAG
GAGATAGTGG TTGCCATCAG CGCGGACGAC AAGGAGGAGG CGACCGAGTC CTTCAGCCTG
GTCCTGTCGA GCGATGATGA GCAAGTTGCC GTCTCTGACA ACAGCATTGC CAACGTCAAC
ATTGTCGATA ACACCAGCTC GTCGAAAGGG GGCGCGGGTC TACAGCTACT GCTGGGTGCC
TTGCTCGCCT TCGGATGGCG CAGAAGAGTG AATCGTTAA
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| Protein sequence | MGIKKSTWQG CSSVGLAGLL ATVSAFSCAA SSPVVGESLN QASSTPLVKL ANKMLVSNKL
KFQPTAQTKL AKPSISASNQ ALMEAQYQEQ MASAVALEQY SDTAVQAEPG SGAMPAPELN
FDGLTRSGFD EAPMPDAAGD VGRDHYVQVV NMAFAVWDKE GNLLVDRTPM TEFWKRLGGV
CGDPNANPAP AKPWESPTTE REPIVLYDQL ADRWVVTQNA YVSGKESRQC FAVSKTSDPT
GDWHLYEFEL NGDKWHNGAQ LGVWSDGYYL SANQHNKSDN SKAGTAAVVF ERDKMLYGVP
ARSIYFDAPL TANLLPVDLD GKRAPAAGTP NYFLSLQDDK VHGSAQDEIQ VWAFKADWNN
PQNSQFSQVA ALATEPFDIN EACGNTCIEQ DSWGGDSYNA LKAYQDKLMY RAAFRQFGDH
QSLVVNHTVD VGEQHFGVRW YEIRNLGAGA EIFQQGSYAP DVNHRWLASM AMDASGNIGM
GFAISGEEML PSVRYTGRLN GDPLGQISLA EQVLVDAEAA QVNSFDGHYG KRSMMTIDPT
DDCSFWYTQE YGADHDFESM WATRIGKFSF PNCVADPTGM LHGVVTDSVT GLPLANAEVV
AGPYSTVADE EGKYQLQLPV GDYQVSARAY GHTKASQGSV SVAKDADLER NVVLTEMPQV
TISGKISDGS GHGWGVPGAI SQNGELIPTM PIATDAIDGS FSVVGYEGWP VAITARAPGY
QPETMDLVPG SDGVSGLAFN LAVDKQVCSA LGYRKIDTNT ASLVNFESPD FPPQGWTVVD
AAGTGIVWKT NEQWERPNNT TGEGLAASID SDKGGRKAYD SSLLTPIMSV AELGGFTTVR
FKEGFRPSGD SALDMDISVD GGEWQTLHSA NASEQGTVVN VDIGEALVGG SNFRLRWRYH
NANEFAWDWW AQIDDVEFGL GCSMEQGGLA VGNITDANTQ EAIAQAKVWL GDTQVATNTE
GQYRLFESAG NQVISATQSG YGVSNSQLTV TDNKIAVQHL SLKAGMLEVD KPELAATVRS
GKQSELSLTV KNVGSRGVNY RLGELAATVE GELENPVLEA ELGFGESIEK SSLGLAVPYS
ATIDRNTGDL WVNNVKLFGG DNKLYRYSAE GKLIGEVIDF SAMLPENALV TDLAFNSRTG
MLWQAALFAD NCIHEIDPNK LMVTGKRICP GVGGISGLAY DPVSGDFIAG VSNKMSISYF
NEDGEVHLTK DVGIAPAGLA YNSATGHLFI STNGPADPGS EKVDQALDIY TVDSHDDFRM
IGALDVPGMS NYGQTGLDID CDGNLRLVDI EGSKMFTVSS GETGVCDHKD VTWLDVSHTS
GQLSVAGEQE VTFDVDTSDL APGVHQVQLL LQSDTPYGTQ AIPLSLTVEA KVPGAVGFKA
TSYEVNEADG SVTLMVERLG GVDGEVSVNY RAVDGTATAG EDFTLAEGTL IWADQDAAAK
EIVVAISADD KEEATESFSL VLSSDDEQVA VSDNSIANVN IVDNTSSSKG GAGLQLLLGA
LLAFGWRRRV NR
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