| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3222 |
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| Symbol | |
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| ID | 4921546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3845775 |
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| End bp | 3846386 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164832 |
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| Product | protein of unknown function DUF335, SprT |
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| Protein accession | YP_001095347 |
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| Protein GI | 127514150 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00097264 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGAC GATTGCAATC CCTGTTTCAC ACGCCTCCGC CAGAATCATC CAGGCTTACC
TCCAAAGCGT CTAAATCAAA AACGTCTAAG CCTCCAGCAA ACAGTACCGA GCTTAACGCG
CATCAGCAGC TTATTCTCGA GGCCGTTGAA TCTTGCTATC AAACGGCAGA GGGGCAACTT
AAGCGCGACT TTCAGCGCCC CGAGGTGAAC TTCAAACTCA GGGGCAAGAG CGCCGGCACC
GCCCATCTGC AGCTCAACAA GCTGAGGTTC AACCCTGTGT TGTTAGAGGA AAACCTAGAT
GAGTTTATCC GGCAGGTGGT GCCCCACGAG ATCTGTCACC TGCTCGCCTA TCAGCTCTAT
GGCCGGGTCA AACCCCACGG CAAGGAGTGG CAGGCCTTGA TGGTGAAACT CTATGGCCTG
ACCCCCAGCA CCACCCACAG CCTGAATACC GACTCTGTCG CCGGCCGAAC CTTCGACTAT
CGCTGCCGCT GCGGCGTCGT GCCGCTGAGC ATTCGCAGAC ACAACAAGGT GCAGCGCCAA
GAGACCCAGT ATCGCTGCCG CCGCTGCCAT GAGACGCTAA GCCTCCTAGA TGGCACAGAC
GGCGAGGCAT GA
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| Protein sequence | MFRRLQSLFH TPPPESSRLT SKASKSKTSK PPANSTELNA HQQLILEAVE SCYQTAEGQL
KRDFQRPEVN FKLRGKSAGT AHLQLNKLRF NPVLLEENLD EFIRQVVPHE ICHLLAYQLY
GRVKPHGKEW QALMVKLYGL TPSTTHSLNT DSVAGRTFDY RCRCGVVPLS IRRHNKVQRQ
ETQYRCRRCH ETLSLLDGTD GEA
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